Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_K24
         (1104 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-P...    31   2.8  
AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-P...    31   2.8  

>AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-PA,
           isoform A protein.
          Length = 1350

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 215 LNVPIVFYDETYXXVXVNXHGVLTFHRGSP 304
           L  PI FY E Y  + +N +G+LTF+   P
Sbjct: 62  LEQPIHFYGEQYEQLYINTNGILTFNSEFP 91


>AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-PB,
           isoform B protein.
          Length = 1370

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 215 LNVPIVFYDETYXXVXVNXHGVLTFHRGSP 304
           L  PI FY E Y  + +N +G+LTF+   P
Sbjct: 62  LEQPIHFYGEQYEQLYINTNGILTFNSEFP 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,196,736
Number of Sequences: 53049
Number of extensions: 166432
Number of successful extensions: 119
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5739749274
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)