Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_K23
         (874 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-P...    30   4.8  
AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-P...    30   4.8  
AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p pro...    29   8.4  
AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-P...    29   8.4  

>AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-PA,
           isoform A protein.
          Length = 1420

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
 Frame = +3

Query: 399 ITPFYLLL*KTIYNHMIPESPTQDFERTPIIISSKINDLTNDTENLRLISDSCTSPITSK 578
           I PF  L  K   + M+ +SP    ++    I +++     D E+    ++        +
Sbjct: 576 IKPFDELESKNAKDEMVEQSPMSK-QKAENKILARLESFEEDVEDHG--NEEENEEEHEE 632

Query: 579 DKDNSCETYMEAKEFSPDLISPKNLCNGFLDSTFNDTLQDNEEPL-GSSTASKETLEANK 755
           DK  S    +EA++   D +S  ++     DS+    +++NE P+ G S  SK+T E+  
Sbjct: 633 DKSISEFVDLEAEDAGKDYMSGDSM-----DSSLRREMEENEIPIDGESVGSKDTEESTP 687

Query: 756 SNENNQPS 779
              +   S
Sbjct: 688 EESDGDDS 695


>AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-PB,
           isoform B protein.
          Length = 1430

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
 Frame = +3

Query: 399 ITPFYLLL*KTIYNHMIPESPTQDFERTPIIISSKINDLTNDTENLRLISDSCTSPITSK 578
           I PF  L  K   + M+ +SP    ++    I +++     D E+    ++        +
Sbjct: 586 IKPFDELESKNAKDEMVEQSPMSK-QKAENKILARLESFEEDVEDHG--NEEENEEEHEE 642

Query: 579 DKDNSCETYMEAKEFSPDLISPKNLCNGFLDSTFNDTLQDNEEPL-GSSTASKETLEANK 755
           DK  S    +EA++   D +S  ++     DS+    +++NE P+ G S  SK+T E+  
Sbjct: 643 DKSISEFVDLEAEDAGKDYMSGDSM-----DSSLRREMEENEIPIDGESVGSKDTEESTP 697

Query: 756 SNENNQPS 779
              +   S
Sbjct: 698 EESDGDDS 705


>AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p
           protein.
          Length = 1253

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 23/99 (23%), Positives = 37/99 (37%)
 Frame = +3

Query: 477 RTPIIISSKINDLTNDTENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPDLISPKNLC 656
           RTP +  S+        E     SD    PI  ++ +   E  +E+      +I      
Sbjct: 305 RTPSVELSETTANVEQKEIAGHKSDEALKPILEEEPEPEVEKRIESNAEQVIIIDKPKKR 364

Query: 657 NGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNENNQ 773
                S  +DTL DN+E + +        E+  SN + Q
Sbjct: 365 LRKASSKESDTLLDNKEKINTDLEVANKAESTHSNNSEQ 403


>AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-PA
           protein.
          Length = 1298

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 23/99 (23%), Positives = 37/99 (37%)
 Frame = +3

Query: 477 RTPIIISSKINDLTNDTENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPDLISPKNLC 656
           RTP +  S+        E     SD    PI  ++ +   E  +E+      +I      
Sbjct: 350 RTPSVELSETTANVEQKEIAGHKSDEALKPILEEEPEPEVEKRIESNAEQVIIIDKPKKR 409

Query: 657 NGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNENNQ 773
                S  +DTL DN+E + +        E+  SN + Q
Sbjct: 410 LRKASSKESDTLLDNKEKINTDLEVANKAESTHSNNSEQ 448


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,698,113
Number of Sequences: 53049
Number of extensions: 593679
Number of successful extensions: 1552
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1552
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)