Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_K23
         (874 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     26   0.52 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   4.9  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   8.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   8.5  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 0.52
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 504 INDLTNDTENLRLISDSCTSPITSKDKDNSCETYMEAKEFS 626
           I  LT DT+  RL +    S +   +KD+     +  KEFS
Sbjct: 239 IKKLTEDTQERRLSNKGSISKLQFHNKDDDLILTLGKKEFS 279


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
 Frame = +3

Query: 465 QDFER-TPIIISSKINDLTNDTENLRLISDSCTSPI---TSKDKDNSCETYMEAKEFSPD 632
           QD E+   + I S  +   ND +    I D   + +    +K+K N C  + E K     
Sbjct: 70  QDTEKLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFECENKEKSNVCLKFEEQKRRKKS 129

Query: 633 LISPKNLCNGFLDS 674
           L   K L N  +DS
Sbjct: 130 LDDVKILRNDRIDS 143


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -2

Query: 486 LEFVQNLELE--IRGSYDCKWFFITADRMGLLCINFSSPFVDSN 361
           +EF  + E+    RG+ + KW     ++ G L    S  FVD++
Sbjct: 265 IEFKYSYEISNAFRGNNNLKWLVNWGEQWGFLPSKDSLVFVDNH 308


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 721 QLPPKKPWKP 750
           +LPP K WKP
Sbjct: 102 RLPPDKVWKP 111


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 721 QLPPKKPWKPTSLM 762
           ++PP + WKP  LM
Sbjct: 99  RIPPHRLWKPDVLM 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,437
Number of Sequences: 438
Number of extensions: 4233
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)