Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_K20
(933 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D26598-1|BAA05645.1| 205|Homo sapiens proteasome subunit HsC10-... 183 7e-46
BC013008-1|AAH13008.1| 205|Homo sapiens proteasome (prosome, ma... 183 7e-46
BC002570-1|AAH02570.1| 205|Homo sapiens proteasome (prosome, ma... 183 7e-46
DQ120692-1|ABB92464.1| 204|Homo sapiens rcPSMB3 protein. 158 3e-38
D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5 pro... 75 3e-13
BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome, ma... 75 3e-13
BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome, ma... 75 3e-13
BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome, ma... 75 3e-13
AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome, ma... 75 3e-13
AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome, ma... 75 3e-13
AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subun... 75 3e-13
AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subun... 75 3e-13
D26599-1|BAA05646.1| 201|Homo sapiens proteasome subunit HsC7-I... 36 0.21
CR456862-1|CAG33143.1| 201|Homo sapiens PSMB2 protein. 36 0.21
BT007137-1|AAP35801.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.21
BC107901-1|AAI07902.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.21
BC105126-1|AAI05127.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.21
BC101836-1|AAI01837.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.21
AL357035-1|CAI22074.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.21
AL354864-3|CAC36031.2| 201|Homo sapiens proteasome (prosome, ma... 36 0.21
AL157951-2|CAI23521.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.21
AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 36 0.21
>D26598-1|BAA05645.1| 205|Homo sapiens proteasome subunit HsC10-II
protein.
Length = 205
Score = 183 bits (446), Expect = 7e-46
Identities = 82/121 (67%), Positives = 103/121 (85%)
Frame = +1
Query: 139 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 318
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 319 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 498
QTV QRLKFR+NLYELKE R ++P T +M++NLLYE+RFGPY+ EPVIAGLDP +P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 499 V 501
+
Sbjct: 121 I 121
>BC013008-1|AAH13008.1| 205|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 3 protein.
Length = 205
Score = 183 bits (446), Expect = 7e-46
Identities = 82/121 (67%), Positives = 103/121 (85%)
Frame = +1
Query: 139 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 318
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 319 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 498
QTV QRLKFR+NLYELKE R ++P T +M++NLLYE+RFGPY+ EPVIAGLDP +P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 499 V 501
+
Sbjct: 121 I 121
>BC002570-1|AAH02570.1| 205|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 3 protein.
Length = 205
Score = 183 bits (446), Expect = 7e-46
Identities = 82/121 (67%), Positives = 103/121 (85%)
Frame = +1
Query: 139 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 318
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 319 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 498
QTV QRLKFR+NLYELKE R ++P T +M++NLLYE+RFGPY+ EPVIAGLDP +P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 499 V 501
+
Sbjct: 121 I 121
>DQ120692-1|ABB92464.1| 204|Homo sapiens rcPSMB3 protein.
Length = 204
Score = 158 bits (383), Expect = 3e-38
Identities = 71/120 (59%), Positives = 97/120 (80%)
Frame = +1
Query: 139 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 318
MSI++YNGGA++AMKG++ VAIA D+ FGIQAQ V+T+F ++F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 319 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 498
Q V Q LKF++NLYELKE + ++P TF++M++N LYE+ FGPY+ +PVIAGLD +P+
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
>D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5
protein.
Length = 241
Score = 75.4 bits (177), Expect = 3e-13
Identities = 34/108 (31%), Positives = 60/108 (55%)
Frame = +1
Query: 154 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 333
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 334 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 477
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD 142
>BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 75.4 bits (177), Expect = 3e-13
Identities = 34/108 (31%), Positives = 60/108 (55%)
Frame = +1
Query: 154 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 333
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 334 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 477
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD 142
>BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 75.4 bits (177), Expect = 3e-13
Identities = 34/108 (31%), Positives = 60/108 (55%)
Frame = +1
Query: 154 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 333
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 334 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 477
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD 142
>BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 75.4 bits (177), Expect = 3e-13
Identities = 34/108 (31%), Positives = 60/108 (55%)
Frame = +1
Query: 154 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 333
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 334 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 477
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD 142
>AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 75.4 bits (177), Expect = 3e-13
Identities = 34/108 (31%), Positives = 60/108 (55%)
Frame = +1
Query: 154 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 333
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 334 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 477
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD 142
>AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 75.4 bits (177), Expect = 3e-13
Identities = 34/108 (31%), Positives = 60/108 (55%)
Frame = +1
Query: 154 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 333
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 334 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 477
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD 142
>AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 241
Score = 75.4 bits (177), Expect = 3e-13
Identities = 34/108 (31%), Positives = 60/108 (55%)
Frame = +1
Query: 154 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 333
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTK 94
Query: 334 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 477
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD 142
>AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 196
Score = 75.4 bits (177), Expect = 3e-13
Identities = 34/108 (31%), Positives = 60/108 (55%)
Frame = +1
Query: 154 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 333
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 40 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 99
Query: 334 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 477
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD
Sbjct: 100 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD 147
>D26599-1|BAA05646.1| 201|Homo sapiens proteasome subunit HsC7-I
protein.
Length = 201
Score = 35.9 bits (79), Expect = 0.21
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 169 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 348
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 349 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYD 486
+ LY+++ + P + L + R PY + ++AG D ++
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHE 111
>CR456862-1|CAG33143.1| 201|Homo sapiens PSMB2 protein.
Length = 201
Score = 35.9 bits (79), Expect = 0.21
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 169 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 348
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 349 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYD 486
+ LY+++ + P + L + R PY + ++AG D ++
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHE 111
>BT007137-1|AAP35801.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 35.9 bits (79), Expect = 0.21
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 169 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 348
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 349 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYD 486
+ LY+++ + P + L + R PY + ++AG D ++
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHE 111
>BC107901-1|AAI07902.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 35.9 bits (79), Expect = 0.21
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 169 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 348
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 349 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYD 486
+ LY+++ + P + L + R PY + ++AG D ++
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHE 111
>BC105126-1|AAI05127.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 35.9 bits (79), Expect = 0.21
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 169 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 348
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 349 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYD 486
+ LY+++ + P + L + R PY + ++AG D ++
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHE 111
>BC101836-1|AAI01837.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 35.9 bits (79), Expect = 0.21
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 169 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 348
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 349 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYD 486
+ LY+++ + P + L + R PY + ++AG D ++
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHE 111
>AL357035-1|CAI22074.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 35.9 bits (79), Expect = 0.21
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 169 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 348
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 349 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYD 486
+ LY+++ + P + L + R PY + ++AG D ++
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHE 111
>AL354864-3|CAC36031.2| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 35.9 bits (79), Expect = 0.21
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 169 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 348
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 349 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYD 486
+ LY+++ + P + L + R PY + ++AG D ++
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHE 111
>AL157951-2|CAI23521.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 35.9 bits (79), Expect = 0.21
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 169 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 348
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 349 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYD 486
+ LY+++ + P + L + R PY + ++AG D ++
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHE 111
>AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit
variant protein.
Length = 249
Score = 35.9 bits (79), Expect = 0.21
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 169 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 348
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 36 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 95
Query: 349 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYD 486
+ LY+++ + P + L + R PY + ++AG D ++
Sbjct: 96 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHE 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,220,750
Number of Sequences: 237096
Number of extensions: 1485764
Number of successful extensions: 6216
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6214
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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