Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_K19
(1080 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.004
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.052
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.21
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 0.53
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.64
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.5
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 2.6
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.6
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 4.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 6.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 7.9
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 7.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.1 bits (87), Expect = 0.001
Identities = 23/75 (30%), Positives = 25/75 (33%)
Frame = +1
Query: 316 PPPPPXXGXXXPSPLXXXNPXAPXXLXGPHPPXAGPXXXLAPXRXGXXXXPPPPPXXGGX 495
PPPPP P+P P + GP PP P A G PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGA----GPPPPPPPPPAVSAG 788
Query: 496 XGXXXPPXXQPXXPP 540
P Q P
Sbjct: 789 GSRYYAPAPQAEPEP 803
Score = 35.5 bits (78), Expect = 0.013
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +1
Query: 406 PPXAGPXXXLAPXRXGXXXXPPPPPXXGGXXGXXXPPXXQPXXPPPPP 549
PP P + PPP P GG PP PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 35.1 bits (77), Expect = 0.017
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +3
Query: 315 APPPPXXGXXXTLPPXXXQPXGPPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
+PPPP P P PP P PP P PG A PPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP--PPPPPGVAGAGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.040
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 381 PPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPPXXXGXXXXG 506
PPPPP P P P P A PPPP G G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG 774
Score = 33.9 bits (74), Expect = 0.040
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +3
Query: 300 PXVXGAPPPPXXGXXXTLPPXXXQPXGPPPPPXPXP 407
P + G PPPP PP GPPPPP P P
Sbjct: 756 PIMGGPPPPP--------PPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 318 PPPPXXGXXXTLP-PXXXQPXGPPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
PPPP ++P P + PPPPP P GR P P + + PP P
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR---QPPPLSSSRAVSNPPAP 391
Score = 34.3 bits (75), Expect = 0.030
Identities = 23/82 (28%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Frame = +1
Query: 316 PPPPPXXGXXXPSPLXXXNPXAPXXLXGPHPPXAGPXXXLAPXRXGXXXX----PPPPPX 483
PP PP + L P P PP + P G PPPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPP-----PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344
Query: 484 XGGXXGXXXPPXXQPXXPPPPP 549
PP + PPPPP
Sbjct: 345 SNAAGSIPLPPQGRSAPPPPPP 366
Score = 33.9 bits (74), Expect = 0.040
Identities = 24/84 (28%), Positives = 25/84 (29%), Gaps = 4/84 (4%)
Frame = +1
Query: 310 RGPPPPPXXGXXXPSPLXXXNPXAPXXLXGPHPPXAGPXXXLAPXRXGXXXXPPPPPXXG 489
R PPPPP P N + L P PP P PPPPP
Sbjct: 310 RPPPPPPPSRRNRGKP-PIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 490 GXXGXXXPPXXQP----XXPPPPP 549
PP PP PP
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPP 392
Score = 33.1 bits (72), Expect = 0.069
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +3
Query: 312 GAPPPPXXGXXXTLPPXXXQPXGPPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
G PP +LPP P P PP GR P P + PPP
Sbjct: 323 GKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 31.1 bits (67), Expect = 0.28
Identities = 27/100 (27%), Positives = 29/100 (29%), Gaps = 6/100 (6%)
Frame = +3
Query: 195 PPXPXXXIXGGXXXXXPPXGSXXXXXXXXXXXAXXPXVXGAPPPPXXGXXXTLPPXXXQ- 371
PP P I G PP G+ P PP + PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPV-----PTPPSLPPSAPPSLPPSAPPSLPMG 442
Query: 372 -PXGPPPPPX----PXPPXGRPXXXPGPXXARXXXTXPPP 476
P PP PP P P G P P P A P P
Sbjct: 443 APAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 29.1 bits (62), Expect = 1.1
Identities = 24/88 (27%), Positives = 26/88 (29%), Gaps = 10/88 (11%)
Frame = +1
Query: 316 PPPPPXXGXXXPSPLXXXNPXAPXXLXG--------PHPPXAGPXXXLAPXRXGXXXXPP 471
P PPP G P P AP + P PP + A PP
Sbjct: 255 PIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPP 314
Query: 472 PPP--XXGGXXGXXXPPXXQPXXPPPPP 549
PPP G PPPPP
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 28.7 bits (61), Expect = 1.5
Identities = 26/109 (23%), Positives = 27/109 (24%), Gaps = 2/109 (1%)
Frame = +3
Query: 171 PXTXXXAXPPXPXXXIXGGXXXXXPPXGSXXXXXXXXXXXAXXPXVXGAPPPPXXGXXXT 350
P A PP P P S A A PP +
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 351 LPPXXXQPXGPPPPPXPXPPXGRPXXXPGPXXARXXXTXPP--PPXXXG 491
PP P PP P PP P G A P PP G
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG 462
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/52 (26%), Positives = 18/52 (34%)
Frame = +1
Query: 910 PXARPXRGGRSXXPXXPXAXHSPRPRXXPXPPXXPXRAPVPGXXPSRXTRXP 1065
P + P S P P + P P PP P P+P P+ P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 AXXPXVXGAP-PPPXXGXXXTLPPXXXQPXGPPPPPXPXPPXGRP 422
A P AP PP PP P P PPP P P P
Sbjct: 445 AAPPLPPSAPIAPPLPAGMPAAPPLP--PAAPAPPPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 291 AXXPXVXGAPPPPXXGXXXTLPPXXXQPXGPPPPPXPXPPXGRPXXXP 434
A P APP P P P PPP P P G P
Sbjct: 221 AGTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPP 268
Score = 26.6 bits (56), Expect = 6.0
Identities = 26/90 (28%), Positives = 27/90 (30%), Gaps = 5/90 (5%)
Frame = +1
Query: 301 PXXRGPPPPPXXGXXXPSPLXXXNPXAPXXLXG--PHPPXAGPXXX---LAPXRXGXXXX 465
P R PPPP PS P + P PP A P L P
Sbjct: 355 PQGRSAPPPPPP-RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 466 PPPPPXXGGXXGXXXPPXXQPXXPPPPPXG 555
PP P PP P PP P G
Sbjct: 414 TPPVPTPPSLP-PSAPPSLPPSAPPSLPMG 442
Score = 26.2 bits (55), Expect = 7.9
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = +1
Query: 319 PPPPXXGXXXPSPLXXXNPXAPXXLX--GPHPPXAGPXXXLAPXRX-GXXXXPPPPP 480
PP P PS P AP L P P P +AP G PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.052
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 354 PPXXXQPXGPPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
PP P PPPP PP P GP A PPPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSA------PPPP 1734
Score = 31.1 bits (67), Expect = 0.28
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 315 APPPPXXGXXXTLPPXXXQPXGPPPPPXPXPPXGRPXXXPGPXXARXXXTXPPP 476
A PP PP PPPP P P G P P P A + P P
Sbjct: 1697 AAPPQMSAPTPPPPPMSV----PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 291 AXXPXVXGAPPPPXXGXXXTLPPXXXQPXGPPPPPXPXPPXGRPXXXPGP 440
A P + PPP P P GPP P P P P P
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 436 APXRXGXXXXPPPPPXXGGXXGXXXPPXXQPXXPPPP 546
AP + PPPP P P PPPP
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 7.9
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +1
Query: 373 PXAPXXLXGPHPPXAGPXXXLAPXRXGXXXXPPPPPXXGGXXGXXXPPXXQPXXPPPPP 549
P P P A P AP PPPPP P P PPPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPT-------PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.21
Identities = 21/82 (25%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Frame = +1
Query: 301 PXXRGPPPPPXXGXXXPSPLXXXN-PXAPXXLXGPHPPXAGPXXXLAPXRXGXXXXPPPP 477
P R PP P P PL + P P P P + G PPP
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPV 1066
Query: 478 PXXGGXXGXXXPPXXQPXXPPP 543
P P P P P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAP 1088
Score = 30.3 bits (65), Expect = 0.49
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Frame = +3
Query: 312 GAP--PPPXXGXXXTLPPXXXQPXGPPPPPXPX--PPXGRPXXXPGPXXARXXXTXPPPP 479
GAP PPP +P P G PP P P PP +P P + PP P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPA-PSGAPPVPAPSGIPPVPKPSVA-APPVPKPSVAVPPVP 1115
Query: 480 XXXG 491
G
Sbjct: 1116 APSG 1119
Score = 30.3 bits (65), Expect = 0.49
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 5/64 (7%)
Frame = +3
Query: 300 PXVXGAPPPPXXGXXXTLPPXXXQPXGPPPPPXP---XPPXGRP--XXXPGPXXARXXXT 464
P GAPP P P P G PP P P PP P P P A
Sbjct: 1134 PVPSGAPPVPKPS---VAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 465 XPPP 476
PPP
Sbjct: 1191 VPPP 1194
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 8/68 (11%)
Frame = +3
Query: 300 PXVXGAPP--------PPXXGXXXTLPPXXXQPXGPPPPPXPXPPXGRPXXXPGPXXARX 455
P GAPP PP +PP G PP P P P G
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 456 XXTXPPPP 479
T PP P
Sbjct: 1213 PSTAPPVP 1220
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Frame = +3
Query: 300 PXVXGAPPPPXXGXXXTLP-PXXXQPXGPPP----PPXPXPPXGRPXXXP 434
P GAPP P +P P P P P PP P P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 27.5 bits (58), Expect = 3.4
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +3
Query: 300 PXVXGAPPPPXXGXXXTLPPXXXQPXGPPPPPXP---XPPXGRPXXXPGPXXARXXXTXP 470
P GAPP P P P G PP P P PP P P + P
Sbjct: 1115 PAPSGAPPVPKPS---VAAPPVPVPSGAPPVPKPSVAAPPV--PAPSGAPPVPKPSVAAP 1169
Query: 471 PPP 479
P P
Sbjct: 1170 PVP 1172
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +3
Query: 312 GAPPPPXXGXXXTLP-PXXXQPXGPPPPPXPXPPXGRPXXXPGPXXARXXXTXPPP 476
G PP P +P P P PPP P P P P P P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +3
Query: 300 PXVXGAPPPPXXGXXXTLPPXXXQPXGPPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
P V P P G P P P P P PP +P P A P P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAP--PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 480 XXXG 491
G
Sbjct: 1184 PAAG 1187
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.4 bits (53), Expect(2) = 0.53
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 348 TLPPXXXQPXGPPPPPXP 401
+LP P PPPPP P
Sbjct: 897 SLPTIITHPTPPPPPPLP 914
Score = 23.0 bits (47), Expect(2) = 0.53
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 384 PPPPXPXPP 410
PPPP P PP
Sbjct: 945 PPPPPPPPP 953
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.64
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 312 GAPPPPXXGXXXTLPPXXXQPXGPPPPPXP 401
G PPPP PP P PPPPP P
Sbjct: 7 GNPPPPPP------PPGFEPPSQPPPPPPP 30
Score = 29.9 bits (64), Expect = 0.64
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +1
Query: 466 PPPPPXXGGXXGXXXPPXXQPXXPPPPPXGHXXXR 570
PPPPP G P QP PPPPP G+ R
Sbjct: 9 PPPPPPPPG-----FEPPSQP--PPPPPPGYVKKR 36
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = +3
Query: 372 PXGPPPPPXPXP---PXGRPXXXPGPXXARXXXTXPP 473
P G PPPP P P P +P P P + P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -3
Query: 439 GPGXXXGRPXG-GXGXGG-GGGPXGXXXXGGRVCXXPXWGGGGAP 311
GPG G P G G G GG GGG G G P GG G P
Sbjct: 229 GPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP--GGHGGP 271
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = -1
Query: 549 GGGGGXXWLXXGGXXXXXPPPXXGGG-GGXXGGPXPXGG 436
G GGG G P GGG GG GGP GG
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = -3
Query: 478 GGGGXVXXXRAXXGPGXXXGRPXGGXGXGG-GGGPXGXXXXGGRVCXXPXWGGGG 317
G GG G G G G GG GGGP G G P GGG
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Frame = +3
Query: 318 PPPPXX---GXXXTLPPXXXQPXG--PPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
PPPP G PP +P PPPP P P P P PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPP 263
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Frame = +3
Query: 318 PPPPXX---GXXXTLPPXXXQPXG--PPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
PPPP G PP +P PPPP P P P P PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPP 276
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Frame = +3
Query: 318 PPPPXX---GXXXTLPPXXXQPXG--PPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
PPPP G PP +P PPPP P P P P PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPP 289
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Frame = +3
Query: 318 PPPPXX---GXXXTLPPXXXQPXG--PPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
PPPP G PP +P PPPP P P P P PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPP 302
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Frame = +3
Query: 318 PPPPXX---GXXXTLPPXXXQPXG--PPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
PPPP G PP +P PPPP P P P P PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPP 315
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Frame = +3
Query: 318 PPPPXX---GXXXTLPPXXXQPXG--PPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
PPPP G PP +P PPPP P P P P PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPP 328
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Frame = +3
Query: 318 PPPPXX---GXXXTLPPXXXQPXG--PPPPPXPXPPXGRPXXXPGPXXARXXXTXPPPP 479
PPPP G PP +P PPPP P P P P PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPP 341
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 548 GGGGGXXGWXXGGXXXPXXPPXXGGGGGXXXXPXRXGARXXXGPAXGGXG 399
GG GG G G G GG R GAR G + GG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 324 PPXXGXXXTLPPXXXQPXGPPPPPXPXPPXGRP 422
P G LPP P G P PP P P G P
Sbjct: 484 PFIPGTSAPLPPTTFAPPGVPLPPIPGAP-GMP 515
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = +3
Query: 321 PPPXXGXXXTLPPXXXQ-PXGPPPPPXPXPPXGRPXXXPGPXXA--RXXXTXPPPP 479
PPP +P P PPP P P P P A PPPP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.2 bits (55), Expect = 7.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 372 PXGPPPPPXPXPPXGRP 422
P PPPPP P P P
Sbjct: 3 PAPPPPPPAPAPAAAAP 19
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +3
Query: 315 APPPPXXGXXXTLPPXXXQPXGPPPPPXPXPP 410
+PPP P PPPP P PP
Sbjct: 166 SPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 316 PPPPPXXGXXXPSPLXXXNPXAP 384
PPPPP PSP P AP
Sbjct: 290 PPPPPGMVMASPSPAAATIPGAP 312
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,762,460
Number of Sequences: 5004
Number of extensions: 26613
Number of successful extensions: 417
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 567771870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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