Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_K15
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021...    96   4e-20
06_01_0671 - 4899611-4899829,4900870-4901448                           62   8e-10
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957...    59   4e-09
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080     58   1e-08
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700...    38   2e-04
02_01_0691 - 5167260-5167937                                           41   0.001
07_03_0575 - 19637277-19637681                                         29   3.8  
03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917     29   5.0  
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710           29   5.0  
03_05_0276 + 22646416-22646760,22646858-22647090,22647184-226472...    29   6.7  
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975...    29   6.7  
01_03_0105 + 12604125-12604583                                         29   6.7  
07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893     28   8.8  
05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524           28   8.8  
03_03_0101 - 14431327-14432390,14432599-14432731                       28   8.8  
02_03_0183 + 16106205-16106474                                         28   8.8  
02_02_0154 + 7263707-7263782,7263908-7264248                           28   8.8  
01_06_0448 + 29462920-29463052,29463220-29463349,29463608-294637...    28   8.8  
01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496     28   8.8  

>02_04_0116 +
           19901546-19901737,19901825-19901899,19902034-19902115,
           19902219-19902298,19903279-19903482,19903625-19903750,
           19903872-19903985,19904802-19904918
          Length = 329

 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 45/71 (63%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = +1

Query: 199 NPLPXFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKI 375
           N  P F A AV + EF ++ LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ DEF K+
Sbjct: 72  NKAPDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKL 131

Query: 376 GCEVLGASTDS 408
             E+LG S DS
Sbjct: 132 NTEILGVSIDS 142



 Score = 69.7 bits (163), Expect = 3e-12
 Identities = 31/53 (58%), Positives = 38/53 (71%)
 Frame = +1

Query: 412 FTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIID 570
           F+HLAW+ T RK GGLG +  PLISD +  IS+ +GVL  + GI  RGLFIID
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIID 264


>06_01_0671 - 4899611-4899829,4900870-4901448
          Length = 265

 Score = 61.7 bits (143), Expect = 8e-10
 Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
 Frame = +1

Query: 253 ISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWI 432
           +SLS +KG+ VV++FYP D T  C  +  AF +  ++F+K G EV+G S D   +H  + 
Sbjct: 137 VSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHKEF- 195

Query: 433 NTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIID 570
              +K+  L P    L+SD+ +++ +++GV  +  G +P R  +++D
Sbjct: 196 ---KKKYKL-PFT--LLSDEGNKVRKEWGVPADLFGTLPGRQTYVLD 236


>07_03_1427 +
           26495072-26495148,26495323-26495468,26495581-26495729,
           26495829-26496224
          Length = 255

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
 Frame = +1

Query: 253 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 429
           I + D+ G  YV+LF +P DFT VC TE+ A +  A EF K G ++LG S D   +H  W
Sbjct: 57  IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDW 116

Query: 430 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLD----EETG--IPFRGLFIIDDKQNLRL 591
           I           +  P+++D S    +   ++D    +  G  +P R L I+   + ++L
Sbjct: 117 IKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKL 176


>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
          Length = 220

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
 Frame = +1

Query: 253 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 429
           I L D+ G  YV++F +P DFT VC TE+   +  A EF K G ++LG S D   +H  W
Sbjct: 22  IRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDW 81

Query: 430 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLD---EETG---IPFRGLFIIDDKQNLRL 591
           I           +  P+++D      R   ++D   ++T    +P R L I+   + ++L
Sbjct: 82  IKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKL 141


>04_03_0889 +
           20568984-20569037,20569271-20569345,20569981-20570088,
           20572066-20572179,20572393-20572509
          Length = 155

 Score = 38.3 bits (85), Expect(2) = 2e-04
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +1

Query: 316 FVCPTEIIAFSEKADEFRKIGCEVLGASTDS 408
           FV   EI AFS++ +EF KI  EVLG S DS
Sbjct: 48  FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78



 Score = 24.6 bits (51), Expect(2) = 2e-04
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 517 GVLDEETGIPFRGLFIID 570
           GV  +  GI  RGLFIID
Sbjct: 73  GVSIDSVGIALRGLFIID 90


>02_01_0691 - 5167260-5167937
          Length = 225

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = +1

Query: 235 NGEFKDISLSDYK-GKYVVLFFYPLDFTFVCPTEII-AFSEKADEFRKIGCEVLGA-STD 405
           +GE K +++++   G+  VLF  P  FT  C  + +  F EKA E    G + +   S +
Sbjct: 81  DGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVN 140

Query: 406 SHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGV 522
             F   AW    ++  GLG  ++ L+SD +  ++R  GV
Sbjct: 141 DAFVMRAW----KESLGLGDADVLLLSDGNLELTRALGV 175


>07_03_0575 - 19637277-19637681
          Length = 134

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = -2

Query: 491 LSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSSAFSENAMISVGHT 318
           +  +     G  P C R V +     K ESV A    + +L N   F  NA   VG T
Sbjct: 49  IKFLSNKLSGHEPTCKRIVAVGTGSSKSESVVAVDKVESMLCNLDRFEANAQHEVGPT 106


>03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917
          Length = 447

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 432 QHAAQAGRTRSHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAE 581
           QH A+A R R  +   DK +   H PR+    R   HP  R    +++AE
Sbjct: 166 QHRARAARLRLLD--DDKEKPLLHTPRMMPTRRSPHHPRFRHQQQQQEAE 213


>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
          Length = 275

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +1

Query: 442 RKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNL 585
           +K+ G G  N+P   D   R ++DY  +DE+  +P    F I D++ +
Sbjct: 65  KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGM 112


>03_05_0276 +
           22646416-22646760,22646858-22647090,22647184-22647259,
           22647383-22647459,22647559-22647592,22647699-22647848,
           22647935-22648069,22648156-22648227
          Length = 373

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 588 PEVLLVVDDEESSEGDARLLVQHS 517
           P V++VVDD+E  EGD +L   ++
Sbjct: 81  PAVVVVVDDDEEGEGDPQLCAPYA 104


>03_02_0602 +
           9759055-9759223,9759305-9759455,9759548-9759593,
           9759974-9760033,9760519-9760555,9761268-9761347,
           9761413-9761516,9761613-9761673,9762962-9763019,
           9763866-9763918,9764357-9765320,9766131-9766185,
           9767223-9768786
          Length = 1133

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
 Frame = -2

Query: 554 PRKGMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQ- 378
           P    P   +ST  S     D +  RG+  G  PP L        C++C SV A   +  
Sbjct: 369 PSAAAPTGFASTDRSGGAGRDRAFARGICFGDPPPALS----PQYCLRCLSVAAKELADG 424

Query: 377 -PILRNSSAFSENAMISVGHTNVKS 306
            P  R ++ +++    S   T+  S
Sbjct: 425 CPAKRRAAVWTDGCFASFADTSALS 449


>01_03_0105 + 12604125-12604583
          Length = 152

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +3

Query: 462 SHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQ 587
           SH+H     Q +P   +LR  GR DG       H RRQ   Q
Sbjct: 62  SHQHKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQPSLQ 103


>07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893
          Length = 342

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 550 GRGCPSPRPALRSRGRCGATCRL 482
           G GC S  P L    RCG +CRL
Sbjct: 33  GHGCWSSVPKLAGLERCGKSCRL 55


>05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524
          Length = 427

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 550 GRGCPSPRPALRSRGRCGATCRL 482
           G GC S  P L    RCG +CRL
Sbjct: 33  GHGCWSSVPKLAGLQRCGKSCRL 55


>03_03_0101 - 14431327-14432390,14432599-14432731
          Length = 398

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 550 GRGCPSPRPALRSRGRCGATCRL 482
           G GC S  P L    RCG +CRL
Sbjct: 33  GHGCWSSVPKLAGLERCGKSCRL 55


>02_03_0183 + 16106205-16106474
          Length = 89

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 475 PLISDKSHRISRDYGVLDEETGIP 546
           PL S   HR SR +G L E +G P
Sbjct: 59  PLASSHEHRFSRLHGCLPESSGFP 82


>02_02_0154 + 7263707-7263782,7263908-7264248
          Length = 138

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -2

Query: 545 GMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTS 381
           G+  +S +T  S +  C LSL   +   PS  CL+     A  + C +  AP  S
Sbjct: 25  GVIATSKATSKSYKAACTLSLATCLPSLPSDKCLKAAFAAATSLLCLTAGAPPPS 79


>01_06_0448 +
           29462920-29463052,29463220-29463349,29463608-29463732,
           29463923-29464458
          Length = 307

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 550 GRGCPSPRPALRSRGRCGATCRL 482
           G GC S  P L    RCG +CRL
Sbjct: 33  GHGCWSSVPRLAGLQRCGKSCRL 55


>01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496
          Length = 428

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 550 GRGCPSPRPALRSRGRCGATCRL 482
           G GC S  P L    RCG +CRL
Sbjct: 33  GHGCWSTVPKLAGLQRCGKSCRL 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,950,916
Number of Sequences: 37544
Number of extensions: 271279
Number of successful extensions: 949
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)