Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_K03
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1060 + 10958632-10958871,10959006-10959272                      118   8e-27

>12_01_1060 + 10958632-10958871,10959006-10959272
          Length = 168

 Score =  118 bits (283), Expect = 8e-27
 Identities = 58/84 (69%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
 Frame = +1

Query: 283 VKKPMFTLX-VMDELKRIIIDSEIMHEDDRLWPQPDRVGRQELEIVIGEEHISFTTSKTG 459
           ++K +F    V+ E +RII +SEIM EDD  WP+PDRVGRQELEIV+G EHISFTTSK G
Sbjct: 58  IRKEVFVSPSVLREARRIIQESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIG 117

Query: 460 SLVDVNQSRDPEGLRGFYYLVQDL 531
           SLVDV  S+DPEGLR FYYLVQ L
Sbjct: 118 SLVDVQTSKDPEGLRIFYYLVQVL 141



 Score =  110 bits (264), Expect = 2e-24
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +3

Query: 153 DFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHP 305
           +FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE +V P
Sbjct: 16  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSP 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,519,389
Number of Sequences: 37544
Number of extensions: 308475
Number of successful extensions: 601
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)