Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_J24
(880 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 65 1e-11
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 64 3e-11
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 64 3e-11
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 62 1e-10
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 49 1e-06
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 40 6e-04
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 39 0.001
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 35 0.018
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 31 0.16
SPBC17D1.02 |||diphthamide biosynthesis protein |Schizosaccharom... 31 0.22
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 29 0.87
SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 28 1.5
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 28 1.5
SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe... 27 3.5
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 27 3.5
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 26 6.1
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 26 6.1
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 64.9 bits (151), Expect = 1e-11
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 335 DALVNNAAVA-VCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISS 511
D LVNN A V + D +D TF N+ + +++ M K+ +IVN SS
Sbjct: 123 DVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHM---KSGSSIVNCSS 179
Query: 512 QASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIK 691
+ D Y+++K A+ A TR ++ + +GIRVNA+ P I T + V + P +
Sbjct: 180 INAYVGRPDLLDYTSTKGAITAFTRGLSNQYAQHGIRVNAVAPGPIYTPL--VSSTFPKE 237
Query: 692 ANEMLSKIPLGRFGE 736
E+ ++PLGR G+
Sbjct: 238 KIELSDQVPLGRMGQ 252
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 64.1 bits (149), Expect = 3e-11
Identities = 34/107 (31%), Positives = 57/107 (53%)
Frame = +2
Query: 341 LVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQAS 520
L+NNA P +D + K DVN V+ +++ ++I K G IVN++S S
Sbjct: 81 LINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVIRMNKAFQHQLIRAK--GTIVNVNSLVS 138
Query: 521 KAALKDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 661
+ Y+ASKAAL A + + +EL P+G++V +I + T++
Sbjct: 139 YVPFAFNAAYNASKAALLAYSNTLRIELAPFGVQVTSIMTGGVQTKI 185
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 64.1 bits (149), Expect = 3e-11
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +2
Query: 335 DALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGA---IVNI 505
D +V+ A V + S D N+ + + +S++ + NK I+NI
Sbjct: 77 DTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKMAILEWFRNKNSERDRLILNI 136
Query: 506 SSQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDP 685
SS+ S AL ++Y+ASKA L++ T+ +A E+ GIRVNAI+P + T M S
Sbjct: 137 SSRLSTYALPGTSVYAASKAGLESFTKVLAAEVASKGIRVNAISPGYVDTPML----SSQ 192
Query: 686 IKANEMLSKIPLGR 727
I+A K+P+GR
Sbjct: 193 IRAIAE-KKVPIGR 205
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 62.1 bits (144), Expect = 1e-10
Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Frame = +2
Query: 335 DALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQ 514
D L+NNA +A PF S ++D + ++ + V M + G+IVNI S
Sbjct: 75 DVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGSV 134
Query: 515 ASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGW-SDPIK 691
L YSA+KA L+ LT+A+A+ GP GIRVN P I + + P
Sbjct: 135 NGHIYLGSPA-YSAAKAGLENLTKALAVRYGPLGIRVNVCAPGTIWSPAWDERFKKHPDV 193
Query: 692 ANEMLSKIPLGRFG 733
+ M P+GR G
Sbjct: 194 GDRMKRWYPVGRLG 207
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 48.8 bits (111), Expect = 1e-06
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Frame = +2
Query: 335 DALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQ 514
D ++NNA + F + + +VN V I++ M E+ G I+ ISS
Sbjct: 77 DIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKEALNLMRESGKGGRILQISSV 136
Query: 515 ASKAALKDHTIYSASKAALDALTRAMALELGP-YGIRVNAINPTVIMTEMA--KVGWSDP 685
A ++Y+ASK A++ L++ + EL P + I + + P + TE A + W+ P
Sbjct: 137 AGYYPSPCLSMYNASKFAVEGLSQTIMRELDPNWNIAITIVQPGGMQTEWASSNMQWAKP 196
Query: 686 IKANE 700
A E
Sbjct: 197 HPAYE 201
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 39.5 bits (88), Expect = 6e-04
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +2
Query: 344 VNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASK 523
VN+ +P L S + + NV +++ Q + E K + S A
Sbjct: 89 VNSGISKSFQPVLKTSDELWMSHYQTNVLGPIHVYQAFYHLLKEGKLKNIVFTSSMAACM 148
Query: 524 AALKDHTI--YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 661
++ +T Y SKAAL+ + ++ EL G V +I+P V+ T+M
Sbjct: 149 GGVRPNTYSAYGQSKAALNYTMKEISFELEKDGFVVVSIHPGVVNTDM 196
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 38.7 bits (86), Expect = 0.001
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = +2
Query: 338 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 517
AL+N AA+A L S K F+ NV L I+ + ++++ + +VNI+S
Sbjct: 109 ALINAAAIAPKNHLLSISRQELQKCFETNVIGQLAITSALFPLLLQDP-NPHVVNIASSL 167
Query: 518 SKAALKDHTIYSASKAALDALTRAMALEL 604
+ + YS+SKAAL +L + E+
Sbjct: 168 AYFSAMGVGAYSSSKAALVSLHETLEEEV 196
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 34.7 bits (76), Expect = 0.018
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 335 DALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKM--IENKTHGAIVNIS 508
D +V+ A + F + PS F+K N A + + R+M I I+ +
Sbjct: 102 DHVVHCAGSCIPGFFTELDPSVFEKQMRQNYLASVYVCHAAIRRMKEISPSYSRRILLVG 161
Query: 509 SQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMT 655
S S + ++ YS KAA+ L ++ E Y I V+ P+ I++
Sbjct: 162 SLLSSLPIIGYSAYSPVKAAVRNLADSLRQECILYDIEVSVYLPSTILS 210
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 31.5 bits (68), Expect = 0.16
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 344 VNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASK 523
VN+A P ++ ++ + NV +++ Q + + ++ + S S
Sbjct: 88 VNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIHVYQAFYPLIKKGRSKIIVFTSSLAGSM 147
Query: 524 AAL--KDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAK 667
A + Y SKAAL+ + ++ EL G V +I+P + T+ A+
Sbjct: 148 GAFFPSSQSAYGQSKAALNYTMKEISFELQDEGFIVISIHPGAVRTDSAQ 197
>SPBC17D1.02 |||diphthamide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 503
Score = 31.1 bits (67), Expect = 0.22
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = -2
Query: 771 QEETTAFTTSDISPNLPSGI-LESISLAFIGSDQPTLAISVIITVGLIAFTLIPYGPSSK 595
+E +T++T + +LP + L+ ++L +IG D PTL+ S++++ + + + P S
Sbjct: 190 EEASTSYTIPGRTYSLPKSLSLQDMTLLYIGPDSPTLS-SILMSHYSLVNQFLSFDPLSN 248
Query: 594 AI 589
I
Sbjct: 249 KI 250
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 29.1 bits (62), Expect = 0.87
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 413 FDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALK--DHTIYSASKAALDALTR 586
+ NV +++ + + + KT I S S + + Y SKAA++ +
Sbjct: 111 YQTNVLGPIHVFKAFYPLLTKKKTRQVIFTSSECGSMGDFRATGFSAYGQSKAAINFTMK 170
Query: 587 AMALELGPYGIRVNAINPTVIMTEM 661
+++EL +I+P V+ T+M
Sbjct: 171 ELSVELADEHFTFISIHPGVVKTDM 195
>SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr
2|||Manual
Length = 482
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 732 PNLPSGILESISLAFIGSDQPTLAISVIITVGLIAFTLIPYGPSSKAIA 586
PN P L IS A Q ++ +GL+ L+PY PS + A
Sbjct: 334 PN-PMNFLRRISKADFYDIQTRTVAKYLVEIGLLDHKLLPYPPSQQCAA 381
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 548 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAK 667
Y SKAAL+ + ++ EL G V +I+P ++ T+ A+
Sbjct: 158 YGQSKAALNFTMKEISFELQDEGFIVISIHPGMVRTDSAQ 197
>SPBC16H5.11c |skb1|rmt5|type II protein arginine
N-methyltransferase Skb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 645
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 388 TVQKWFTYSNSCVVHQRIKVTLKIQQPSSSSPNLLYQR 275
T + W T ++C H R+KV L++ P+ S P L R
Sbjct: 175 TWKMWDTIRSACGYHPRLKVALEL-PPACSPPIELVNR 211
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 548 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAK 667
Y SK A + A+A L YGI +++P VI TE+ +
Sbjct: 213 YGQSKYAQILYSIALAKRLEKYGIYSVSLHPGVIRTELTR 252
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 356 AVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQV 454
++++ E +DCSPS D+ D ++A+ I ++
Sbjct: 1122 SLSILEKLVDCSPSIIDEQVDTILEALRKIIEL 1154
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 118 KGKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSI 264
KG +VT +L +G N+V +SRT+ L++L E ++
Sbjct: 56 KGYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELETV 104
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,324,852
Number of Sequences: 5004
Number of extensions: 65241
Number of successful extensions: 203
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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