Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_J24
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    46   6e-07
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.6  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   6.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.5  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   8.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   8.6  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   8.6  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 45.6 bits (103), Expect = 6e-07
 Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
 Frame = +2

Query: 335 DALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENK--THGAIVNIS 508
           D L+NNA + +     +    ++ K FD+N+  +  + Q V  K+++ K   +G IVNI+
Sbjct: 86  DILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCMIQEVL-KLMKKKGINNGIIVNIN 144

Query: 509 SQASKAAL---KDHTIYSASKAALDALTRAMALELG--PYGIRVNAINPTVIMTEMAKVG 673
             +    L   ++   Y ASK AL  LT  +  EL      I+V +I+P ++ T+M    
Sbjct: 145 DASGLNLLPMNRNRPAYLASKCALTTLTDCLRSELAQCESNIKVISISPDLVETDMT-AQ 203

Query: 674 WSDPIKANEMLSKIP 718
           W   +K N  L+  P
Sbjct: 204 W---LKENSRLALKP 215


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = -2

Query: 837 LCSEETTIYGQFYTINHTRSFTQEET-TAFTTSDISPNLPSGILESISLAFIGSDQPTLA 661
           + ++    YG  Y  NHT S  + +T T +   + +  + +G+   + +  I  +  TL 
Sbjct: 1   MANQTANYYGDVYQWNHTVSSGERDTRTEYYLPNWTDLVLAGLFTMLIIVTIVGN--TLV 58

Query: 660 ISVIIT 643
           I+ +IT
Sbjct: 59  IAAVIT 64


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 315 NNLPRLLPISYINVYNVYRGVFT 247
           N LP  + I+  N Y V +G FT
Sbjct: 52  NILPNNISIAGQNTYKVAKGAFT 74


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 747 TSDISPNLPSGILESISLAFIGSDQPT 667
           +S  SP+ PS    S+S   +GS+  T
Sbjct: 88  SSSPSPSSPSSFFSSVSPTSLGSENYT 114


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 753 FTTSDISPNLPSGILESISLAFIGSDQPT 667
           F T+  SP    G+LE  S AF G+  PT
Sbjct: 911 FATAASSP----GLLERASPAFSGTSSPT 935


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
 Frame = -3

Query: 575 HPK---QLLKHCRWCGLSE 528
           HP+   +L K C+W G+ E
Sbjct: 340 HPRYRQELQKRCKWMGIHE 358


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 407 CQSCSANSPKMVHIQQQLRCSPTHQSDTKD 318
           C++C A+S    +   + RC P +    KD
Sbjct: 279 CEACPAHSKSSDYGFTECRCDPGYFRAEKD 308


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
 Frame = -3

Query: 575 HPK---QLLKHCRWCGLSE 528
           HP+   +L K C+W G+ E
Sbjct: 340 HPRYRQELQKRCKWMGIHE 358


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,326
Number of Sequences: 438
Number of extensions: 4184
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)