Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_J16
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 44 1e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 44 1e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 44 1e-04
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.017
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.017
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 35 0.090
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 33 0.28
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.64
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.64
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.64
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.1
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 30 1.9
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 30 1.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 5.9
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 5.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/86 (34%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Frame = +3
Query: 639 PXXXGXXPLTXXXXGXPPKXXLGKXXPEKXXTPPXXPP-GXXPFXXXXXPPPPXXXXQKX 815
P G P+T G PP G P PP PP G P PPPP
Sbjct: 714 PPPPGLPPITG---GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 816 XXPPFXPGGXNPRXXXKXXPPGGPPP 893
PP PGG K PP PPP
Sbjct: 771 PPPPPPPGG------FKGGPPPPPPP 790
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 6/58 (10%)
Frame = +3
Query: 738 PXXPPGXXPFXXXXXPPPPXXXXQK---XXXPPFXPGGXNP---RXXXKXXPPGGPPP 893
P PPG P PPPP PP PGG P PPGG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/94 (29%), Positives = 28/94 (29%), Gaps = 2/94 (2%)
Frame = +2
Query: 614 PXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXXPPXXXSXXXXXPAXPP 793
P G P P G P G PP G P P PP P PP
Sbjct: 721 PITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPP--GGCPPPPPPPP 776
Query: 794 XGXXXKXPXPPFXPGGXKP--PXXX*XXPPXGSP 889
G P PP PG P P PP P
Sbjct: 777 PGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/80 (25%), Positives = 21/80 (26%)
Frame = +3
Query: 639 PXXXGXXPLTXXXXGXPPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXX 818
P G P G PP P P PP P PPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Query: 819 XPPFXPGGXNPRXXXKXXPP 878
P P P+ K P
Sbjct: 796 MAPVIPDYLPPKKVPKVDGP 815
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/86 (34%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Frame = +3
Query: 639 PXXXGXXPLTXXXXGXPPKXXLGKXXPEKXXTPPXXPP-GXXPFXXXXXPPPPXXXXQKX 815
P G P+T G PP G P PP PP G P PPPP
Sbjct: 714 PPPPGLPPITG---GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 816 XXPPFXPGGXNPRXXXKXXPPGGPPP 893
PP PGG K PP PPP
Sbjct: 771 PPPPPPPGG------FKGGPPPPPPP 790
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 6/58 (10%)
Frame = +3
Query: 738 PXXPPGXXPFXXXXXPPPPXXXXQK---XXXPPFXPGGXNP---RXXXKXXPPGGPPP 893
P PPG P PPPP PP PGG P PPGG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/94 (29%), Positives = 28/94 (29%), Gaps = 2/94 (2%)
Frame = +2
Query: 614 PXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXXPPXXXSXXXXXPAXPP 793
P G P P G P G PP G P P PP P PP
Sbjct: 721 PITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPP--GGCPPPPPPPP 776
Query: 794 XGXXXKXPXPPFXPGGXKP--PXXX*XXPPXGSP 889
G P PP PG P P PP P
Sbjct: 777 PGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/80 (25%), Positives = 21/80 (26%)
Frame = +3
Query: 639 PXXXGXXPLTXXXXGXPPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXX 818
P G P G PP P P PP P PPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Query: 819 XPPFXPGGXNPRXXXKXXPP 878
P P P+ K P
Sbjct: 796 MAPVIPDYLPPKKVPKVDGP 815
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/86 (34%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Frame = +3
Query: 639 PXXXGXXPLTXXXXGXPPKXXLGKXXPEKXXTPPXXPP-GXXPFXXXXXPPPPXXXXQKX 815
P G P+T G PP G P PP PP G P PPPP
Sbjct: 297 PPPPGLPPITG---GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 816 XXPPFXPGGXNPRXXXKXXPPGGPPP 893
PP PGG K PP PPP
Sbjct: 354 PPPPPPPGG------FKGGPPPPPPP 373
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 6/58 (10%)
Frame = +3
Query: 738 PXXPPGXXPFXXXXXPPPPXXXXQK---XXXPPFXPGGXNP---RXXXKXXPPGGPPP 893
P PPG P PPPP PP PGG P PPGG PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/94 (29%), Positives = 28/94 (29%), Gaps = 2/94 (2%)
Frame = +2
Query: 614 PXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXXPPXXXSXXXXXPAXPP 793
P G P P G P G PP G P P PP P PP
Sbjct: 304 PITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPP--GGCPPPPPPPP 359
Query: 794 XGXXXKXPXPPFXPGGXKP--PXXX*XXPPXGSP 889
G P PP PG P P PP P
Sbjct: 360 PGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/80 (25%), Positives = 21/80 (26%)
Frame = +3
Query: 639 PXXXGXXPLTXXXXGXPPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXX 818
P G P G PP P P PP P PPPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Query: 819 XPPFXPGGXNPRXXXKXXPP 878
P P P+ K P
Sbjct: 379 MAPVIPDYLPPKKVPKVDGP 398
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/98 (27%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Frame = +2
Query: 596 AXKXPXPXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXXP----PXXXS 763
A P P G P P GSPP + G P +P P P
Sbjct: 234 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Query: 764 XXXXXPAXPPXGXXXKXPXPPFXPGGXKPPXXX*XXPP 877
P PP G PP GG PP PP
Sbjct: 294 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/85 (29%), Positives = 27/85 (31%)
Frame = +3
Query: 639 PXXXGXXPLTXXXXGXPPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXX 818
P G PL PP G P + +PP P G P PPP
Sbjct: 241 PPPKGSPPLAGSG-SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 819 XPPFXPGGXNPRXXXKXXPPGGPPP 893
PP P G P GG PP
Sbjct: 300 PPP--PRGSPPTGSLPPPQAGGSPP 322
Score = 36.3 bits (80), Expect = 0.030
Identities = 29/109 (26%), Positives = 31/109 (28%), Gaps = 1/109 (0%)
Frame = +2
Query: 569 PPXKTFXQKAXKX-PXPXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXX 745
PP K A P P G P P P PP G P + +P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Query: 746 PPXXXSXXXXXPAXPPXGXXXKXPXPPFXPGGXKPPXXX*XXPPXGSPP 892
PP S P G PP G PP P SPP
Sbjct: 301 PPPRGSPPTGSLPPPQAG----GSPPPAGTGSPPPPPRQKRQAPERSPP 345
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/103 (26%), Positives = 30/103 (29%), Gaps = 6/103 (5%)
Frame = +2
Query: 602 KXPXPXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXXPPXXXSXXXXXP 781
K P G P P P PP G P + +P P
Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Query: 782 AXPPXGXXXKXPXPP---FXPGGXKPPXXX*XXPP---XGSPP 892
+ PP P PP P G PP PP GSPP
Sbjct: 288 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Score = 31.5 bits (68), Expect = 0.84
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Frame = +3
Query: 717 PEKXXTPPXXPP-GXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPRXXXKXXPP--GGP 887
P PP PP G P PPPP PP G P PP GG
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS---PPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 888 PP 893
PP
Sbjct: 289 PP 290
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/98 (27%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Frame = +2
Query: 596 AXKXPXPXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXXP----PXXXS 763
A P P G P P GSPP + G P +P P P
Sbjct: 255 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Query: 764 XXXXXPAXPPXGXXXKXPXPPFXPGGXKPPXXX*XXPP 877
P PP G PP GG PP PP
Sbjct: 315 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/85 (29%), Positives = 27/85 (31%)
Frame = +3
Query: 639 PXXXGXXPLTXXXXGXPPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXX 818
P G PL PP G P + +PP P G P PPP
Sbjct: 262 PPPKGSPPLAGSG-SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 819 XPPFXPGGXNPRXXXKXXPPGGPPP 893
PP P G P GG PP
Sbjct: 321 PPP--PRGSPPTGSLPPPQAGGSPP 343
Score = 36.3 bits (80), Expect = 0.030
Identities = 29/109 (26%), Positives = 31/109 (28%), Gaps = 1/109 (0%)
Frame = +2
Query: 569 PPXKTFXQKAXKX-PXPXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXX 745
PP K A P P G P P P PP G P + +P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Query: 746 PPXXXSXXXXXPAXPPXGXXXKXPXPPFXPGGXKPPXXX*XXPPXGSPP 892
PP S P G PP G PP P SPP
Sbjct: 322 PPPRGSPPTGSLPPPQAG----GSPPPAGTGSPPPPPRQKRQAPERSPP 366
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/103 (26%), Positives = 30/103 (29%), Gaps = 6/103 (5%)
Frame = +2
Query: 602 KXPXPXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXXPPXXXSXXXXXP 781
K P G P P P PP G P + +P P
Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Query: 782 AXPPXGXXXKXPXPP---FXPGGXKPPXXX*XXPP---XGSPP 892
+ PP P PP P G PP PP GSPP
Sbjct: 309 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Score = 31.5 bits (68), Expect = 0.84
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Frame = +3
Query: 717 PEKXXTPPXXPP-GXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPRXXXKXXPP--GGP 887
P PP PP G P PPPP PP G P PP GG
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS---PPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 888 PP 893
PP
Sbjct: 310 PP 311
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/98 (27%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Frame = +2
Query: 596 AXKXPXPXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXXP----PXXXS 763
A P P G P P GSPP + G P +P P P
Sbjct: 240 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Query: 764 XXXXXPAXPPXGXXXKXPXPPFXPGGXKPPXXX*XXPP 877
P PP G PP GG PP PP
Sbjct: 300 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/85 (29%), Positives = 27/85 (31%)
Frame = +3
Query: 639 PXXXGXXPLTXXXXGXPPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXX 818
P G PL PP G P + +PP P G P PPP
Sbjct: 247 PPPKGSPPLAGSG-SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 819 XPPFXPGGXNPRXXXKXXPPGGPPP 893
PP P G P GG PP
Sbjct: 306 PPP--PRGSPPTGSLPPPQAGGSPP 328
Score = 36.3 bits (80), Expect = 0.030
Identities = 29/109 (26%), Positives = 31/109 (28%), Gaps = 1/109 (0%)
Frame = +2
Query: 569 PPXKTFXQKAXKX-PXPXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXX 745
PP K A P P G P P P PP G P + +P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Query: 746 PPXXXSXXXXXPAXPPXGXXXKXPXPPFXPGGXKPPXXX*XXPPXGSPP 892
PP S P G PP G PP P SPP
Sbjct: 307 PPPRGSPPTGSLPPPQAG----GSPPPAGTGSPPPPPRQKRQAPERSPP 351
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/103 (26%), Positives = 30/103 (29%), Gaps = 6/103 (5%)
Frame = +2
Query: 602 KXPXPXKGXGFXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXXPPXXXSXXXXXP 781
K P G P P P PP G P + +P P
Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Query: 782 AXPPXGXXXKXPXPP---FXPGGXKPPXXX*XXPP---XGSPP 892
+ PP P PP P G PP PP GSPP
Sbjct: 294 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Score = 31.5 bits (68), Expect = 0.84
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Frame = +3
Query: 717 PEKXXTPPXXPP-GXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPRXXXKXXPP--GGP 887
P PP PP G P PPPP PP G P PP GG
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS---PPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 888 PP 893
PP
Sbjct: 295 PP 296
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = +3
Query: 687 PPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPRXXXK 866
PP + P TP P P PPPP + PP PG P +
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
Query: 867 XXPP--GGPPP 893
PP GG PP
Sbjct: 325 FGPPGMGGMPP 335
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/78 (28%), Positives = 22/78 (28%)
Frame = +3
Query: 660 PLTXXXXGXPPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXPG 839
P T PP P PP PG PPPP PP G
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP-----SRFGPPGMGG 332
Query: 840 GXNPRXXXKXXPPGGPPP 893
P P G PPP
Sbjct: 333 MPPPPPPGMRYPGGMPPP 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = +3
Query: 687 PPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPRXXXK 866
PP + P TP P P PPPP + PP PG P +
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
Query: 867 XXPP--GGPPP 893
PP GG PP
Sbjct: 335 FGPPGMGGMPP 345
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/78 (28%), Positives = 22/78 (28%)
Frame = +3
Query: 660 PLTXXXXGXPPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXPG 839
P T PP P PP PG PPPP PP G
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP-----SRFGPPGMGG 342
Query: 840 GXNPRXXXKXXPPGGPPP 893
P P G PPP
Sbjct: 343 MPPPPPPGMRYPGGMPPP 360
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 34.7 bits (76), Expect = 0.090
Identities = 22/83 (26%), Positives = 25/83 (30%)
Frame = +2
Query: 644 PXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXXPPXXXSXXXXXPAXPPXGXXXKXPXP 823
P G P G+PP P PP + P+ P G P
Sbjct: 282 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAP 341
Query: 824 PFXPGGXKPPXXX*XXPPXGSPP 892
P GG P PP G PP
Sbjct: 342 P--SGGPPGPFNPSGAPPSGGPP 362
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 735 PPXXPPGXXPFXXXXXPPPPXXXXQKXXXP-PFXPGGXNPRXXXKXXPPGGPPP 893
PP PPG P PP P + P P+ P +P+ + PPGGPPP
Sbjct: 6 PPNYPPGN-PNQPPPFPPTPYYPMYQAGMPMPYIP--QSPQYP-QPGPPGGPPP 55
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.64
Identities = 24/74 (32%), Positives = 26/74 (35%), Gaps = 5/74 (6%)
Frame = +3
Query: 687 PPKXXL--GKXXPE-KXXTPPXXPPGXXPFXXXXX--PPPPXXXXQKXXXPPFXPGGXNP 851
PP L G+ P+ PP P G P PPPP PP GG P
Sbjct: 47 PPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP 106
Query: 852 RXXXKXXPPGGPPP 893
PP PPP
Sbjct: 107 PPPMFGAPPPPPPP 120
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 363 GGMPPXXXIFFXGXXXXPPXRGXXPPXGXXF 271
GG+PP +F G PP G PP F
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +3
Query: 735 PPXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPRXXXKXXPPGGPPP 893
PP PP P PPPP Q PP P P PP PPP
Sbjct: 31 PPPPPPMCAP-PPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPP--PPP 80
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +3
Query: 687 PPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXXXPP 827
PP + P PP PP P PPPP PP
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.9 bits (69), Expect = 0.64
Identities = 21/69 (30%), Positives = 24/69 (34%)
Frame = -2
Query: 892 GGGPPGGXXLXXXRGFXPPGXKGGXXXFXXXXXGGGGXXXXXXGXXPGGXXGGVXXFSGX 713
GGG GG G G GG + GGGG G GG GG + G
Sbjct: 120 GGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGG-GGYGGG 178
Query: 712 XXPXFXFGG 686
+ GG
Sbjct: 179 GDGGYGGGG 187
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/87 (27%), Positives = 25/87 (28%)
Frame = +2
Query: 632 FXPXPXGXXPXNXXXXGSPPKXKXGXXXPGKXXNPXXXPPXXXSXXXXXPAXPPXGXXXK 811
F P P P PP PG PP P G
Sbjct: 378 FAPPPQSGPPG---AFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSY-GPPQGGPGGF 433
Query: 812 XPXPPFXPGGXKPPXXX*XXPPXGSPP 892
P PP PG PP PP G+PP
Sbjct: 434 GPPPPGGPGAYGPPPT--GFPPVGAPP 458
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/72 (25%), Positives = 20/72 (27%), Gaps = 4/72 (5%)
Frame = +3
Query: 687 PPKXXLGKXXPEKXXTPPXX----PPGXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPR 854
PP + +PP PP PPPP P G P
Sbjct: 231 PPNATIPSFPTSNAASPPVQEFAPPPPQQQQQQFQAPPPPMASHSSISSTPVQQQGFAPP 290
Query: 855 XXXKXXPPGGPP 890
PP GPP
Sbjct: 291 QQFGGPPPSGPP 302
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +3
Query: 735 PPXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPR-XXXKXXPPGGPPP 893
P PPG P PPPP PP G P+ P PPP
Sbjct: 691 PAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPP 744
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -2
Query: 889 GGPPGGXXLXXXRGFXPPGXKGGXXXFXXXXXGGGGXXXXXXGXXPGGXXGGVXXFSGXX 710
GGP G G PG GG F GGG G GG + G
Sbjct: 51 GGPGLGGPGIGGPGLGGPGVGGGPGAFGPYGRYGGGGYGGYGRYGRYGRYGGYGGYGGYG 110
Query: 709 XPXFXFGGXP 680
P + G P
Sbjct: 111 GPGYGGGPGP 120
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -2
Query: 889 GGPPGGXXLXXXRGFXPPGXKGGXXXFXXXXXGGGGXXXXXXGXXPGGXXGGVXXFSGXX 710
GGP G G PG GG F GGG G GG + G
Sbjct: 51 GGPGLGGPGIGGPGLGGPGVGGGPGAFGPYGRYGGGGYGGYGRYGRYGRYGGYGGYGGYG 110
Query: 709 XPXFXFGGXP 680
P + G P
Sbjct: 111 GPGYGGGPGP 120
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 7/76 (9%)
Frame = +3
Query: 687 PPKXXLGKXXPEKXXTPPXXPPGXXPF-XXXXXPPPPXXXXQKXXXPPFXPGGXNPRXXX 863
PP LG PP PG P PPPP PP P P
Sbjct: 505 PPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPP--PPPPLPLDLL 562
Query: 864 K------XXPPGGPPP 893
K PGGPPP
Sbjct: 563 KGAVAGLKSVPGGPPP 578
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 738 PXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPRXXXKXXPPGGPPP 893
P P P PPPP Q PP P P PP P P
Sbjct: 40 PCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRP 91
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +3
Query: 687 PPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXXXPP 827
P + K P PP P P PPPP Q+ PP
Sbjct: 487 PQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPALEQEISGPP 533
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 747 PPGXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPRXXXKXXPPGGPPP 893
PP PPP PP GG PR PPG PPP
Sbjct: 1560 PPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLG--MPPPGPPPP 1606
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 3/72 (4%)
Frame = +3
Query: 687 PPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPP---PXXXXQKXXXPPFXPGGXNPRX 857
PP K PP PP PPP P PP P PR
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRN 182
Query: 858 XXKXXPPGGPPP 893
+ P PPP
Sbjct: 183 PPRTPPSPIPPP 194
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 681 GXPPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPRXX 860
G PPK P P PPG PP + PP PG P
Sbjct: 120 GRPPKEPCEPITPPPCKPCPEGPPGPAG-------PPGPQGNKGPLGPPGPPGPEGPNGT 172
Query: 861 XKXXPPGGPP 890
P GPP
Sbjct: 173 AGNKGPAGPP 182
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 681 GXPPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXPGGXNPRXX 860
G PPK P P PPG PP + PP PG P
Sbjct: 122 GRPPKEPCEPLTPPPCKPCPEGPPGPAG-------PPGPDGNKGPLGPPGPPGPEGPNGE 174
Query: 861 XKXXPPGGPP 890
P GPP
Sbjct: 175 PGNKGPAGPP 184
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 687 PPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXP 836
PP L P+ PP G P PPPP PP P
Sbjct: 202 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 251
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 687 PPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXP 836
PP L P+ PP G P PPPP PP P
Sbjct: 188 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 687 PPKXXLGKXXPEKXXTPPXXPPGXXPFXXXXXPPPPXXXXQKXXXPPFXP 836
PP L P+ PP G P PPPP PP P
Sbjct: 188 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 735 PPXXPPGXXPFXXXXXPPPPXXXXQKXXXPP 827
PP PP P PPPP Q+ PP
Sbjct: 492 PPPLPPIATPSSVPPPPPPPPALEQEISGPP 522
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = +3
Query: 681 GXPPKXXLGKXXPEKXXTPPXXPPGXX--PFXXXXXPPPPXXXXQKXXXPPFXPGGXNPR 854
G PP G P PP P PPPP + PPF P P
Sbjct: 269 GPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMP----PP 324
Query: 855 XXXKXXPPGG--PPP 893
PP G PPP
Sbjct: 325 PHFGMGPPRGFMPPP 339
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = +3
Query: 681 GXPPKXXLGKXXPEKXXTPPXXPPGXX--PFXXXXXPPPPXXXXQKXXXPPFXPGGXNPR 854
G PP G P PP P PPPP + PPF P P
Sbjct: 269 GPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMP----PP 324
Query: 855 XXXKXXPPGG--PPP 893
PP G PPP
Sbjct: 325 PHFGMGPPRGFMPPP 339
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/82 (28%), Positives = 25/82 (30%)
Frame = -3
Query: 852 GGFXPPGXKGGXGFFXXXPXGGXAGXXXKXXXXXGGX*XGFXXFPGXXXPXFXLGGDPXX 673
G PPG GG G P GG AG G G PG + P
Sbjct: 178 GNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQ 237
Query: 672 XXLXGXXPXGXGXXPXPXXGSG 607
G P G P P +G
Sbjct: 238 QGPPG--PPGPAGPPGPAGNAG 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.149 0.503
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,838,000
Number of Sequences: 27780
Number of extensions: 275729
Number of successful extensions: 871
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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