Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_J13
(1200 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.075
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.075
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.075
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.17
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.17
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.53
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 26 0.92
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 26 0.92
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 26 0.94
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 1.6
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 31 1.6
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 31 1.6
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 8.6
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 8.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.075
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
PP GG PPPPPP F GG P PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGF---KGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.53
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
PP GG PPPPPP GG P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPP 748
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
PP G PPPPPP GG P PPP
Sbjct: 747 PPGGLPPISGGPPPPPP--------PPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 4.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXF 554
PP G G PPPPPP F
Sbjct: 773 PPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.075
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
PP GG PPPPPP F GG P PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGF---KGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.53
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
PP GG PPPPPP GG P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPP 748
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
PP G PPPPPP GG P PPP
Sbjct: 747 PPGGLPPISGGPPPPPP--------PPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 4.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXF 554
PP G G PPPPPP F
Sbjct: 773 PPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.075
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
PP GG PPPPPP F GG P PPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGF---KGGPPPPPPP 373
Score = 32.7 bits (71), Expect = 0.53
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
PP GG PPPPPP GG P PPP
Sbjct: 299 PPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPP 331
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
PP G PPPPPP GG P PPP
Sbjct: 330 PPGGLPPISGGPPPPPP--------PPGGCPPPPPP 357
Score = 29.5 bits (63), Expect = 4.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXF 554
PP G G PPPPPP F
Sbjct: 356 PPPPPGGFKGGPPPPPPPGMF 376
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.17
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -3
Query: 598 GXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
G GG PPPPPP + GG P PPP
Sbjct: 329 GMGGMPPPPPPGMRY-----PGGMPPPPPP 353
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 598 GXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
G G PPPPPP F GG P PPP
Sbjct: 312 GMPGMPPPPPPSR--FGPPGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.17
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -3
Query: 598 GXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
G GG PPPPPP + GG P PPP
Sbjct: 339 GMGGMPPPPPPGMRY-----PGGMPPPPPP 363
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 598 GXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
G G PPPPPP F GG P PPP
Sbjct: 322 GMPGMPPPPPPSR--FGPPGMGGMPPPPPP 349
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.53
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPPXXXFFFFXXXGGXPXXPPP 509
PP G PPPPPP GG P PPP
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPML-----GGPPPPPPP 595
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 26.2 bits (55), Expect(2) = 0.92
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 613 PXXXXGXGGXPPPPPP 566
P G G PPPPPP
Sbjct: 56 PRPPIGYGAPPPPPPP 71
Score = 24.2 bits (50), Expect(2) = 0.92
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 589 GXPPPPPPXXXF 554
G PPPPPP F
Sbjct: 63 GAPPPPPPPPAF 74
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 26.2 bits (55), Expect(2) = 0.92
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 613 PXXXXGXGGXPPPPPP 566
P G G PPPPPP
Sbjct: 56 PRPPIGYGAPPPPPPP 71
Score = 24.2 bits (50), Expect(2) = 0.92
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 589 GXPPPPPPXXXF 554
G PPPPPP F
Sbjct: 63 GAPPPPPPPPAF 74
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 26.2 bits (55), Expect(2) = 0.94
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 613 PXXXXGXGGXPPPPPP 566
P G G PPPPPP
Sbjct: 56 PRPPIGYGAPPPPPPP 71
Score = 24.2 bits (50), Expect(2) = 0.94
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 589 GXPPPPPPXXXF 554
G PPPPPP F
Sbjct: 63 GAPPPPPPPPAF 74
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 473 GGGGGGFXFFXXGGGXXXGAPXTXKKKKXXXGGXGG 580
GGGGGG + GGG G + + GG GG
Sbjct: 218 GGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGG 253
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 613 PXXXXGXGGXPPPPPPXXXFFF 548
P G GG PPPPPP FF
Sbjct: 1003 PKAPAGPGGPPPPPPPPPADFF 1024
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 613 PXXXXGXGGXPPPPPPXXXFFF 548
P G GG PPPPPP FF
Sbjct: 242 PKAPAGPGGPPPPPPPPPADFF 263
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +2
Query: 473 GGGGGGFXFFXXGGGXXXGAPXTXKKKKXXXGGXGGXXPPXP 598
GGGGGG+ GGG G + GG GG P P
Sbjct: 247 GGGGGGYMRSGGGGG---GPDRRDHRDNDRNGGGGGHRPYDP 285
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 583 PPPPPPXXXFFFFXXXGGXPXXPPP 509
PPPPPP F P PPP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPP 635
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 583 PPPPPPXXXFFFFXXXGGXPXXPPP 509
PPPPPP F P PPP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPP 461
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPP 566
PP G G PPPPPP
Sbjct: 237 PPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPP 566
PP G G PPPPPP
Sbjct: 223 PPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPXXXXGXGGXPPPPPP 566
PP G G PPPPPP
Sbjct: 223 PPLPPVGAGAPPPPPPP 239
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 598 GXGGXPPPPPPXXXFFFFXXXGGXPXXPP 512
G G PPPPPP GG P PP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPPPP 794
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 598 GXGGXPPPPPPXXXFFFFXXXGGXPXXPP 512
G G PPPPPP GG P PP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPPPP 794
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,222,559
Number of Sequences: 27780
Number of extensions: 99966
Number of successful extensions: 1269
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3297288728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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