Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_J12
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22178-8|CAD82913.1|  307|Caenorhabditis elegans Hypothetical pr...   105   4e-23
Z22178-7|CAA80157.2|  288|Caenorhabditis elegans Hypothetical pr...   105   4e-23
U41993-2|AAO12432.1|  118|Caenorhabditis elegans Hypothetical pr...    30   2.5  
U41993-1|AAO12433.1|  390|Caenorhabditis elegans Hypothetical pr...    30   2.5  

>Z22178-8|CAD82913.1|  307|Caenorhabditis elegans Hypothetical
           protein F54C8.7b protein.
          Length = 307

 Score =  105 bits (252), Expect = 4e-23
 Identities = 54/156 (34%), Positives = 85/156 (54%)
 Frame = +3

Query: 186 STKLESIRNWGVSTYKCTKQLLYEKLGKSSRTVDTELEAQIEMVRETQRKYXXXXXXXXX 365
           + K+ES + W + T+K +KQ L E +GK  +TVD E EAQ E++++  R+Y         
Sbjct: 60  AAKVESFKKWTIGTFKNSKQQLLEHMGKIDKTVDPEFEAQCEVLKDIHRRYGLVVAAAKN 119

Query: 366 XXXXXXXXFDTQRALGEAFADLAQKSPELQNQFLYNADTQRSLTRNGEVLLAALHFFNNS 545
                    + ++ L E+F  L+ K  +++ Q    ++T R +      L A L +F +S
Sbjct: 120 FSHVLTQMAEAEKKLSESFYQLSMKEEQIKAQCTMTSETMRGVGEQAASLDACLRYFISS 179

Query: 546 LNTLTNKTIEDTLLTIRQYESARVEYDAFRXXLXAA 653
           + T+ N+TI DTL TI   ESAR+EYD  R  + AA
Sbjct: 180 METVYNQTITDTLHTIYNTESARIEYDVDRNDISAA 215


>Z22178-7|CAA80157.2|  288|Caenorhabditis elegans Hypothetical
           protein F54C8.7a protein.
          Length = 288

 Score =  105 bits (252), Expect = 4e-23
 Identities = 54/156 (34%), Positives = 85/156 (54%)
 Frame = +3

Query: 186 STKLESIRNWGVSTYKCTKQLLYEKLGKSSRTVDTELEAQIEMVRETQRKYXXXXXXXXX 365
           + K+ES + W + T+K +KQ L E +GK  +TVD E EAQ E++++  R+Y         
Sbjct: 41  AAKVESFKKWTIGTFKNSKQQLLEHMGKIDKTVDPEFEAQCEVLKDIHRRYGLVVAAAKN 100

Query: 366 XXXXXXXXFDTQRALGEAFADLAQKSPELQNQFLYNADTQRSLTRNGEVLLAALHFFNNS 545
                    + ++ L E+F  L+ K  +++ Q    ++T R +      L A L +F +S
Sbjct: 101 FSHVLTQMAEAEKKLSESFYQLSMKEEQIKAQCTMTSETMRGVGEQAASLDACLRYFISS 160

Query: 546 LNTLTNKTIEDTLLTIRQYESARVEYDAFRXXLXAA 653
           + T+ N+TI DTL TI   ESAR+EYD  R  + AA
Sbjct: 161 METVYNQTITDTLHTIYNTESARIEYDVDRNDISAA 196


>U41993-2|AAO12432.1|  118|Caenorhabditis elegans Hypothetical
           protein F44A2.5a protein.
          Length = 118

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +3

Query: 84  KFPTSRSMPFPPAYVPPEVSHNGSAGTSTLLRTGSTKLESIRNWGVSTYKC 236
           K PT+R  P    Y PP +  +GS+ T+ +  T STK +      +S+ +C
Sbjct: 21  KKPTNR--PAMQIYRPPGLRSDGSSSTTAVTTTSSTKPKPAAGQKLSSSEC 69


>U41993-1|AAO12433.1|  390|Caenorhabditis elegans Hypothetical
           protein F44A2.5b protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +3

Query: 84  KFPTSRSMPFPPAYVPPEVSHNGSAGTSTLLRTGSTKLESIRNWGVSTYKC 236
           K PT+R  P    Y PP +  +GS+ T+ +  T STK +      +S+ +C
Sbjct: 21  KKPTNR--PAMQIYRPPGLRSDGSSSTTAVTTTSSTKPKPAAGQKLSSSEC 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,776,600
Number of Sequences: 27780
Number of extensions: 342534
Number of successful extensions: 994
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)