Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_J11
         (996 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896...    25   3.8  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.8  
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954...    29   5.8  

>01_01_1130 +
           8959909-8960396,8960588-8960638,8960736-8960827,
           8960964-8961054,8961877-8961937,8962172-8962216,
           8962318-8962391,8962565-8962637,8963288-8963345,
           8963398-8963468,8963801-8963837,8964040-8964128,
           8964207-8964263,8964366-8964449,8964529-8964627,
           8964765-8964869,8965145-8965216,8965308-8965497,
           8965810-8966207
          Length = 744

 Score = 25.4 bits (53), Expect(2) = 3.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 450 PPHTXPXKKXXPPPPP 497
           PP T P     PPPPP
Sbjct: 75  PPPTPPSPPPPPPPPP 90



 Score = 22.6 bits (46), Expect(2) = 3.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 483 PPPPPLP 503
           PPPPPLP
Sbjct: 129 PPPPPLP 135


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/47 (27%), Positives = 15/47 (31%)
 Frame = +3

Query: 450 PPHTXPXKKXXPPPPPLPXXXXXXXXXXXXXXXXXXXXXKKXXPPPP 590
           PP   P +   PPPPP P                      +  PPPP
Sbjct: 608 PPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPP 654


>07_03_1090 +
           23891294-23892222,23892317-23892516,23895241-23895482,
           23895771-23896461,23896486-23896562
          Length = 712

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 450 PPHTXPXKKXXPPPPPLP 503
           PP T P +   PPPPP P
Sbjct: 213 PPQTNPPRPVRPPPPPPP 230


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,302,522
Number of Sequences: 37544
Number of extensions: 255023
Number of successful extensions: 1470
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2916970260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)