Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_J09
(900 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 87 1e-17
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 87 2e-17
06_01_0312 + 2246899-2247105,2247182-2247374,2247607-2247712,224... 65 6e-11
07_03_1645 + 28348897-28349100,28349263-28349334,28350113-283502... 64 1e-10
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 58 1e-08
04_04_0349 + 24588184-24588315,24588481-24588543,24588674-245887... 37 0.025
06_03_0539 + 21919115-21919313,21919474-21919582,21920595-219208... 33 0.23
06_01_0375 + 2699179-2699264,2699697-2699786,2699913-2699991,270... 32 0.54
06_03_0151 + 17270688-17270698,17271149-17271281,17271548-172715... 31 1.2
02_01_0151 + 1067067-1067222,1067586-1067690,1067904-1067990,106... 31 1.2
06_01_0227 - 1733119-1734099 31 1.6
05_01_0035 - 232656-232781,233212-233322,233419-233563,233749-23... 30 2.2
11_06_0338 + 22479804-22480651,22480764-22482954 29 6.7
06_03_0878 + 25606788-25606926,25607205-25607279,25607362-256074... 28 8.8
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = +3
Query: 420 YFDSYAHFGIHEEMLKDEVRTLTYKNAMYHNKHLFQGKTVLDIGCGTGILSMFAAKAGAT 599
YF SY+ FGIH EML D+VRT Y++A+ N L G TVLD+GCGTGILS+FAAKAGA+
Sbjct: 256 YFGSYSSFGIHREMLGDKVRTEAYRDALLGNPSLMNGATVLDVGCGTGILSLFAAKAGAS 315
Query: 600 K 602
+
Sbjct: 316 R 316
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 86.6 bits (205), Expect = 2e-17
Identities = 35/59 (59%), Positives = 47/59 (79%)
Frame = +3
Query: 420 YFDSYAHFGIHEEMLKDEVRTLTYKNAMYHNKHLFQGKTVLDIGCGTGILSMFAAKAGA 596
YF SY+H GIHE M+KD VRT Y++A+ H++ +GK V+D+GCGTGILS+F A+AGA
Sbjct: 48 YFQSYSHIGIHEAMIKDRVRTDAYRSAIMHHQKFIEGKVVMDVGCGTGILSVFCARAGA 106
>06_01_0312 +
2246899-2247105,2247182-2247374,2247607-2247712,
2247958-2248147,2248472-2248657,2248739-2248822,
2249207-2249383
Length = 380
Score = 65.3 bits (152), Expect = 6e-11
Identities = 35/89 (39%), Positives = 55/89 (61%)
Frame = +3
Query: 336 GTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMYHNK 515
G ++ S GP V +E+ +Y F +Y++ +EML D VR Y +A++ N
Sbjct: 7 GAASASASAAGGGPA--VVDKEVDFANY-FCTYSYLYHQKEMLCDRVRMDAYHSAVFRNA 63
Query: 516 HLFQGKTVLDIGCGTGILSMFAAKAGATK 602
H F+GK VLD+G G+GIL++++A+AGA K
Sbjct: 64 HHFRGKVVLDVGTGSGILAIWSAQAGARK 92
>07_03_1645 +
28348897-28349100,28349263-28349334,28350113-28350266,
28350973-28351116,28351213-28351316,28351401-28351499,
28351582-28351651,28352127-28352223,28352443-28352497,
28353507-28353590,28353851-28353928,28354027-28354130,
28354212-28354635,28355311-28355346
Length = 574
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +3
Query: 390 TAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMYHNKHLFQGKTVLDIGCGTGIL 569
T E +S YF Y + ML+D VRT TY A+ N+ F+G+ V+D+G G+GIL
Sbjct: 161 TKIEASSAKMYFHYYGQLLHQQNMLQDFVRTGTYYAAVMENRSDFEGRVVVDVGAGSGIL 220
Query: 570 SMFAAKAGA 596
S+FAA+AGA
Sbjct: 221 SLFAAQAGA 229
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +3
Query: 420 YFDSYAHFGIHEEMLKDEVRTLTYKNAMYHNKHLFQGKTVLDIGCGTGILSMFAAKAGAT 599
YF +Y+H G+HEEMLK K LF + VLD+GCGTG+LS+F A AGA
Sbjct: 48 YFKAYSHIGVHEEMLKIVNENCDRKRGWMCP--LFLVEVVLDVGCGTGVLSIFCAFAGAA 105
Query: 600 K 602
+
Sbjct: 106 R 106
>04_04_0349 +
24588184-24588315,24588481-24588543,24588674-24588740,
24588819-24588919,24589082-24589126,24589236-24589697,
24589905-24590075
Length = 346
Score = 36.7 bits (81), Expect = 0.025
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 492 KNAMYHNKHLFQGKTVLDIGCGTGILSMFAAKAGAT 599
KN + + F+GK VL++GCG+G+ +FA GA+
Sbjct: 104 KNEIRDGQLSFRGKRVLELGCGSGLAGIFACLKGAS 139
>06_03_0539 +
21919115-21919313,21919474-21919582,21920595-21920819,
21921140-21921239,21921782-21921865,21922000-21922058,
21922578-21922770
Length = 322
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 519 LFQGKTVLDIGCGTGILSMFAAK 587
L G+T+LD+GCG G LS++ AK
Sbjct: 131 LQDGQTILDVGCGWGSLSLYIAK 153
>06_01_0375 +
2699179-2699264,2699697-2699786,2699913-2699991,
2700816-2700893,2701290-2701338,2702183-2702232,
2702704-2702853,2703437-2703517,2703593-2703609,
2705804-2705893,2706033-2706111,2706234-2706311,
2707554-2707687,2707858-2707936,2708108-2708188,
2708263-2708400
Length = 452
Score = 32.3 bits (70), Expect = 0.54
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 525 QGKTVLDIGCGTGILSMFAAKAGAT 599
+G V+D+GCG GILS A+ GAT
Sbjct: 69 EGLKVIDVGCGGGILSEPLARMGAT 93
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 525 QGKTVLDIGCGTGILSMFAAKAGAT 599
+G ++D+GC G+LS A+ GAT
Sbjct: 267 EGLKIIDVGCAAGMLSEPLARMGAT 291
>06_03_0151 +
17270688-17270698,17271149-17271281,17271548-17271589,
17271706-17271815,17271957-17272035,17272114-17272287,
17272386-17272466,17272761-17272988,17273067-17273402,
17273501-17273586,17273642-17273783,17274596-17274687,
17274770-17274904,17275142-17275304,17275393-17275482,
17275568-17275753,17276109-17276141,17276700-17276762,
17276839-17276901,17276983-17277042,17277258-17277410,
17277530-17277613,17278434-17278610,17278685-17278791,
17278858-17279071,17279158-17279261,17279926-17280061,
17280191-17280316,17280682-17280792,17280968-17281066,
17281367-17281633,17281707-17281822,17281853-17282084,
17282597-17282664,17282682-17282807,17282980-17283040
Length = 1495
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 392 CRRNDVEGLLF--RLICTFRHPRGNVKR*SPHSHLQK 496
CRR + L F R++C + H G +R S H HL K
Sbjct: 171 CRRYQITTLYFGQRILCRYNHIFGGKERESSHIHLSK 207
>02_01_0151 +
1067067-1067222,1067586-1067690,1067904-1067990,
1068071-1068121,1068265-1068291,1068292-1068385,
1068610-1068845
Length = 251
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 501 MYHNKHLFQGKTVLDIGCGTGILSMFAAKAGATKGLSD 614
++ + F TV+++G GT + + AAK GA L+D
Sbjct: 73 VWQQRSRFTASTVVELGAGTSLPGLVAAKVGADVTLTD 110
>06_01_0227 - 1733119-1734099
Length = 326
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 528 GKTVLDIGCGTGILSMFAAKAGATKGLSD 614
G TV D GCGTG L++ A GA+ SD
Sbjct: 150 GATVCDAGCGTGSLAIPLASQGASVLASD 178
>05_01_0035 -
232656-232781,233212-233322,233419-233563,233749-233882,
234341-234412,234485-234548,234632-234699,234894-235129,
236857-237166,237495-238460,238752-238931,239041-239346,
239593-239727,239810-240046,240120-240308,240521-240709,
240929-241024,241117-241323,241700-241893,242979-243216
Length = 1400
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 489 YKNAMYHNKHLFQGKTVLDIGCGTGILSMFAAK 587
Y+ H +F+ KTV ++GCG G +S+ A+
Sbjct: 106 YEGLNRHPDSIFRDKTVAELGCGNGWISIALAE 138
>11_06_0338 + 22479804-22480651,22480764-22482954
Length = 1012
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 567 LSMFAAKAGATKGLSDRVXXXXXXXXXXXXRQTDSMMSLRLLKERWRKLNS 719
LS F+AK+ + G +R+ D +LRL ERWRKL S
Sbjct: 719 LSEFSAKSIQSLGDLERLEVLAITWSFHQCSDEDYQEALRLSIERWRKLKS 769
>06_03_0878 +
25606788-25606926,25607205-25607279,25607362-25607426,
25607504-25607606,25607712-25607762,25608271-25608424,
25608781-25608925,25609039-25609144,25609267-25609415
Length = 328
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 522 FQGKTVLDIGCGTGILSMFAAKAGATKGLSDR 617
F G T ++IG GTG++ + A+ ++DR
Sbjct: 115 FNGVTAIEIGAGTGLVGLALARVAKKIFITDR 146
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,147,332
Number of Sequences: 37544
Number of extensions: 321175
Number of successful extensions: 705
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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