Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_J09
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 127 9e-30
AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical ... 35 0.091
U97194-6|AAB52451.2| 244|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 34 0.12
Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical pr... 31 1.5
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 29 3.4
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 29 3.4
L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical... 29 4.5
AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical... 29 4.5
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 29 4.5
AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical ... 29 4.5
X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2 p... 29 6.0
U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alph... 29 6.0
AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeri... 29 6.0
AF125952-5|AAD14697.2| 327|Caenorhabditis elegans Serpentine re... 29 6.0
AC006722-11|AAW88389.1| 327|Caenorhabditis elegans Serpentine r... 29 6.0
Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68299-7|CAJ90495.1| 269|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68299-6|CAA92610.2| 412|Caenorhabditis elegans Hypothetical pr... 28 7.9
U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated p... 28 7.9
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 28 7.9
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 28 7.9
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 28 7.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 7.9
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 28 7.9
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 28 7.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 7.9
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 28 7.9
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 127 bits (307), Expect = 9e-30
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3
Query: 393 AEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMYHNKHLFQGKTVLDIGCGTGILS 572
A+E+TS+DYYFDSYAHFGIHEEMLKDEVRT TY+N++YHN HLF+ K V+D+G GTGILS
Sbjct: 18 AKELTSKDYYFDSYAHFGIHEEMLKDEVRTTTYRNSIYHNSHLFKDKVVMDVGSGTGILS 77
Query: 573 MFAAKAGATK 602
MFAAKAGA K
Sbjct: 78 MFAAKAGAKK 87
>AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical
protein W06D4.4 protein.
Length = 630
Score = 34.7 bits (76), Expect = 0.091
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 492 KNAMYHNKHL-FQGKT-VLDIGCGTGILSMFAAKAGATK 602
K + KH GK VLDIG GTG+LS+ AA+ GA K
Sbjct: 51 KTTIAEKKHENTDGKVHVLDIGTGTGLLSLMAAREGADK 89
>U97194-6|AAB52451.2| 244|Caenorhabditis elegans Hypothetical
protein C37A2.6 protein.
Length = 244
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 510 NKHLFQGKTVLDIGCGTGILSMFAAKAGATKGLSDRV 620
NK LFQG ++D G G G S+ A+ GA K L++ +
Sbjct: 71 NKPLFQGSEIVDFGAGCGSASISASICGAKKILANDI 107
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 423 FDSYAHFGIHEEML-KDEVRTLTYKNAMYHNKHLFQGKTVLDIGCGTGILSMFAAKAGAT 599
F S A+ ++ L +D + T T K A H+ GK VLD+GCG G S + GA
Sbjct: 4 FPSEAYTEAQQKWLGRDHLITPTIKKAF---GHILVGKEVLDVGCGNGHYSFDFLRWGAH 60
Query: 600 K 602
K
Sbjct: 61 K 61
>Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical
protein K01A11.2 protein.
Length = 229
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 510 NKHLFQGKTVLDIGCGTGILSMFAAKAGA 596
N+ LF GK+VL++GCG + S+ A GA
Sbjct: 70 NQTLFAGKSVLELGCGAALPSILTAVHGA 98
>Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical
protein C38D4.9 protein.
Length = 214
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 522 FQGKTVLDIGCGTGILSMFAA 584
F+GK ++DIGCG G+L AA
Sbjct: 46 FEGKKLIDIGCGCGMLMTTAA 66
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 522 FQGKTVLDIGCGTGILSMFAAKAGATKGLSD 614
F+GK VL++G GTG+ + A GA ++D
Sbjct: 52 FEGKKVLELGSGTGVGGIALAALGADVIITD 82
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 522 FQGKTVLDIGCGTGILSMFAAKAGATKGLSD 614
F+GK VL++G GTG+ + A GA ++D
Sbjct: 13 FEGKKVLELGSGTGVGGIALAALGADVIITD 43
>L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical
protein F22B7.9 protein.
Length = 243
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 522 FQGKTVLDIGCGTGILSMFAAKAGA 596
F GK+VL+IG TG+ S++A + GA
Sbjct: 82 FDGKSVLEIGFVTGLPSVYAFENGA 106
>AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical
protein Y17G7B.18b protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +3
Query: 378 DKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRT-LTYKNAMYHNKHLFQGKTVLDIGC 554
++ AE + YF+ +G + + + K K F+ K LDIGC
Sbjct: 101 EEKSAAENRKQKTEYFNKKYRYGNFDRYYGIRLNPGESDKRLSVFQKDWFEHKQALDIGC 160
Query: 555 GTGILSMFAAK 587
G L++ AK
Sbjct: 161 NAGFLTLSIAK 171
>AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical
protein Y17G7B.18a protein.
Length = 378
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +3
Query: 378 DKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRT-LTYKNAMYHNKHLFQGKTVLDIGC 554
++ AE + YF+ +G + + + K K F+ K LDIGC
Sbjct: 98 EEKSAAENRKQKTEYFNKKYRYGNFDRYYGIRLNPGESDKRLSVFQKDWFEHKQALDIGC 157
Query: 555 GTGILSMFAAK 587
G L++ AK
Sbjct: 158 NAGFLTLSIAK 168
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 513 KHLFQGKTVLDIGCGTGILSMFAAKAGATK 602
K+ + K VLDIGCG G+ S + GA K
Sbjct: 33 KYNLKDKKVLDIGCGNGLNSTTFLQWGARK 62
>AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical
protein C33C12.9 protein.
Length = 234
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 531 KTVLDIGCGTGILSMFAAKA 590
K VL+IGCG+G++S F +A
Sbjct: 58 KLVLEIGCGSGVVSTFVNQA 77
>X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2
protein.
Length = 356
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -2
Query: 326 YVHCFHFYNLIIKISYF*QYNLNIFCDKSICHRLSTNKVIINSYN*I*FYTTN 168
++HCF N II I+ +YN +F D++ + + ++ + N F+ TN
Sbjct: 214 WIHCFEDVNAIIFIAALSEYNEVLFEDETTNRMIESMRLFESICNSRWFHNTN 266
>U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alpha
subunit protein 2 protein.
Length = 356
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -2
Query: 326 YVHCFHFYNLIIKISYF*QYNLNIFCDKSICHRLSTNKVIINSYN*I*FYTTN 168
++HCF N II I+ +YN +F D++ + + ++ + N F+ TN
Sbjct: 214 WIHCFEDVNAIIFIAALSEYNEVLFEDETTNRMIESMRLFESICNSRWFHNTN 266
>AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -2
Query: 326 YVHCFHFYNLIIKISYF*QYNLNIFCDKSICHRLSTNKVIINSYN*I*FYTTN 168
++HCF N II I+ +YN +F D++ + + ++ + N F+ TN
Sbjct: 214 WIHCFEDVNAIIFIAALSEYNEVLFEDETTNRMIESMRLFESICNSRWFHNTN 266
>AF125952-5|AAD14697.2| 327|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 61 protein.
Length = 327
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 341 CSFLSYVHCFHFYNLII-KISYF*QYNLNIFCDKSIC 234
C F+ C+H YNL++ I+ NL+ C +++C
Sbjct: 81 CKFIGPWFCYHCYNLLLTMITVTGLINLHTLCYRTMC 117
>AC006722-11|AAW88389.1| 327|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 75 protein.
Length = 327
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 341 CSFLSYVHCFHFYNLII-KISYF*QYNLNIFCDKSIC 234
C F+ C+H YNL++ I+ NL+ C +++C
Sbjct: 81 CKFIGPWFCYHCYNLLLTMITVTGLINLHTLCYRTMC 117
>Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical
protein T23B5.1a protein.
Length = 680
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 450 HEEMLKDEVRTLTYKNAMYHNKHLFQGKTVL-DIGCGTGILSMFAAK 587
H M+ D R + A+ N + TV+ DIG GTGILS AA+
Sbjct: 142 HIRMINDVKRNEAFAKAL--NDTIKSRITVVFDIGSGTGILSAIAAR 186
>Z68299-7|CAJ90495.1| 269|Caenorhabditis elegans Hypothetical
protein T04B2.3b protein.
Length = 269
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 309 METMDVAQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLT 488
MET+ GTS ++ + NV M R ++ G E+ L+ E++ LT
Sbjct: 95 METLTQTISGTSNKELQKLDQEINGNVMTSSMVLRKLANHTFISDGCSEKTLEQEMKDLT 154
Query: 489 YK 494
++
Sbjct: 155 FR 156
>Z68299-6|CAA92610.2| 412|Caenorhabditis elegans Hypothetical
protein T04B2.3a protein.
Length = 412
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 309 METMDVAQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLT 488
MET+ GTS ++ + NV M R ++ G E+ L+ E++ LT
Sbjct: 238 METLTQTISGTSNKELQKLDQEINGNVMTSSMVLRKLANHTFISDGCSEKTLEQEMKDLT 297
Query: 489 YK 494
++
Sbjct: 298 FR 299
>U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated
protein 44, isoform g protein.
Length = 1004
Score = 28.3 bits (60), Expect = 7.9
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 327 AQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMY 506
AQEG +S ++ENG D A + H E+ + V + Y N
Sbjct: 664 AQEGHKEISGLLIENGSDVGAKANNGLTA-------MHLCAQEDHV--PVAQILYNNGAE 714
Query: 507 HNKHLFQGKTVLDIGCGTGILSM--FAAKAGATKGLSDR 617
N G T L + C G L+M F + GA G R
Sbjct: 715 INSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTR 753
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 28.3 bits (60), Expect = 7.9
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 327 AQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMY 506
AQEG +S ++ENG D A + H E+ + V + Y N
Sbjct: 664 AQEGHKEISGLLIENGSDVGAKANNGLTA-------MHLCAQEDHV--PVAQILYNNGAE 714
Query: 507 HNKHLFQGKTVLDIGCGTGILSM--FAAKAGATKGLSDR 617
N G T L + C G L+M F + GA G R
Sbjct: 715 INSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTR 753
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 28.3 bits (60), Expect = 7.9
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 327 AQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMY 506
AQEG +S ++ENG D A + H E+ + V + Y N
Sbjct: 664 AQEGHKEISGLLIENGSDVGAKANNGLTA-------MHLCAQEDHV--PVAQILYNNGAE 714
Query: 507 HNKHLFQGKTVLDIGCGTGILSM--FAAKAGATKGLSDR 617
N G T L + C G L+M F + GA G R
Sbjct: 715 INSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTR 753
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 28.3 bits (60), Expect = 7.9
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 327 AQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMY 506
AQEG +S ++ENG D A + H E+ + V + Y N
Sbjct: 664 AQEGHKEISGLLIENGSDVGAKANNGLTA-------MHLCAQEDHV--PVAQILYNNGAE 714
Query: 507 HNKHLFQGKTVLDIGCGTGILSM--FAAKAGATKGLSDR 617
N G T L + C G L+M F + GA G R
Sbjct: 715 INSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTR 753
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.3 bits (60), Expect = 7.9
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 327 AQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMY 506
AQEG +S ++ENG D A + H E+ + V + Y N
Sbjct: 664 AQEGHKEISGLLIENGSDVGAKANNGLTA-------MHLCAQEDHV--PVAQILYNNGAE 714
Query: 507 HNKHLFQGKTVLDIGCGTGILSM--FAAKAGATKGLSDR 617
N G T L + C G L+M F + GA G R
Sbjct: 715 INSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTR 753
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 28.3 bits (60), Expect = 7.9
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 327 AQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMY 506
AQEG +S ++ENG D A + H E+ + V + Y N
Sbjct: 664 AQEGHKEISGLLIENGSDVGAKANNGLTA-------MHLCAQEDHV--PVAQILYNNGAE 714
Query: 507 HNKHLFQGKTVLDIGCGTGILSM--FAAKAGATKGLSDR 617
N G T L + C G L+M F + GA G R
Sbjct: 715 INSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTR 753
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 28.3 bits (60), Expect = 7.9
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 327 AQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMY 506
AQEG +S ++ENG D A + H E+ + V + Y N
Sbjct: 664 AQEGHKEISGLLIENGSDVGAKANNGLTA-------MHLCAQEDHV--PVAQILYNNGAE 714
Query: 507 HNKHLFQGKTVLDIGCGTGILSM--FAAKAGATKGLSDR 617
N G T L + C G L+M F + GA G R
Sbjct: 715 INSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTR 753
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.3 bits (60), Expect = 7.9
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 327 AQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMY 506
AQEG +S ++ENG D A + H E+ + V + Y N
Sbjct: 664 AQEGHKEISGLLIENGSDVGAKANNGLTA-------MHLCAQEDHV--PVAQILYNNGAE 714
Query: 507 HNKHLFQGKTVLDIGCGTGILSM--FAAKAGATKGLSDR 617
N G T L + C G L+M F + GA G R
Sbjct: 715 INSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTR 753
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 28.3 bits (60), Expect = 7.9
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 327 AQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMY 506
AQEG +S ++ENG D A + H E+ + V + Y N
Sbjct: 664 AQEGHKEISGLLIENGSDVGAKANNGLTA-------MHLCAQEDHV--PVAQILYNNGAE 714
Query: 507 HNKHLFQGKTVLDIGCGTGILSM--FAAKAGATKGLSDR 617
N G T L + C G L+M F + GA G R
Sbjct: 715 INSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTR 753
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,386,664
Number of Sequences: 27780
Number of extensions: 307553
Number of successful extensions: 745
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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