Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_J03
         (920 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   1.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   1.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.5  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
 Frame = -3

Query: 444 SVRSKASATAGADSSSPAPHSSGCARPHRFCSPAPSHAPSGTPNMPDTMVIAPNV-SETL 268
           S+    SAT GA +      ++    P     PAPS   +G+ +    M  + +  SET 
Sbjct: 393 SLNGSGSATNGASNGGSGAPATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSETS 452

Query: 267 S-KENSLPGCKPRPK*ITC 214
           S K+ S  G    P  + C
Sbjct: 453 STKDGSENGSNLWPAWVYC 471


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
 Frame = -3

Query: 444 SVRSKASATAGADSSSPAPHSSGCARPHRFCSPAPSHAPSGTPNMPDTMVIAPNV-SETL 268
           S+    SAT GA +      ++    P     PAPS   +G+ +    M  + +  SET 
Sbjct: 393 SLNGSGSATNGASNGGSGAPATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSETS 452

Query: 267 S-KENSLPGCKPRPK*ITC 214
           S K+ S  G    P  + C
Sbjct: 453 STKDGSENGSNLWPAWVYC 471


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = -3

Query: 423  ATAGADSSSPAPHSSGCARPHRFCSPAPSHAPSGTPNMPDTMVIAPNVSET 271
            A AG+D  + +P      R  R  S   S+A + TP       +AP    +
Sbjct: 1141 AAAGSDGGAGSPAELSGNRERRSPSIPNSNAGAATPTATTAAPLAPTTGNS 1191


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,539
Number of Sequences: 2352
Number of extensions: 12868
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)