Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_J02
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0143 + 5795028-5795108,5795197-5795403,5795878-5795976,579...    54   2e-07
08_01_0009 + 68825-68950,72571-72669,72841-72929,74971-75087,757...    31   1.7  
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523...    29   6.7  

>10_02_0143 +
           5795028-5795108,5795197-5795403,5795878-5795976,
           5796136-5796224,5797876-5797992,5798262-5798367,
           5798522-5798606,5798699-5798808,5799335-5799465,
           5799686-5799782,5800310-5800603
          Length = 471

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
 Frame = +3

Query: 282 MPRTVYSPEHCLQYLEQY--ASKEIFAIGLILGQMTDARENVI--HLARTPEEKGSEIGI 449
           M +TV   E  L+ LE+   AS     +GL++G+++ + +  +   L  TP         
Sbjct: 1   MVKTVVGEEAQLKALEETLSASASPAQVGLVVGKLSASSDRALAYSLIPTPPTDSGAPAC 60

Query: 450 ESNYGLDKPEIAKNLSSVSEA-------WIADHARHVTRMLPGGMFVQGIFVTSDEDVFE 608
                   P+ AK  SS + +       W+A+HAR V+RML GGM V GI++ + E  F+
Sbjct: 61  SLLRAAPNPKAAKAASSDASSSLDFDVDWVAEHARQVSRMLLGGMTVIGIYIWASEASFK 120

Query: 609 DPNCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTXVLTC 755
                +   + L+ + + +S    ++G     +ERL++H+S S     C
Sbjct: 121 -----ATSPAVLSQVLRAVSQVAPLYGT--GVDERLLIHISYSPRRWAC 162


>08_01_0009 +
           68825-68950,72571-72669,72841-72929,74971-75087,
           75747-75906,76419-76549,76810-76906,77584-77877
          Length = 370

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 22/73 (30%), Positives = 39/73 (53%)
 Frame = +3

Query: 537 VTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERL 716
           V+RML GGM V GI++ + E  F+     +   + L+ + + +S    ++G     +ERL
Sbjct: 43  VSRMLLGGMTVIGIYIWASEASFK-----ATSPAVLSQVLRAVSQVAPLYGT--GVDERL 95

Query: 717 ILHMSTSTXVLTC 755
           ++H+S S     C
Sbjct: 96  LIHISYSPRRWAC 108


>05_01_0585 -
           5237547-5237930,5237995-5238072,5238163-5238405,
           5238515-5238661,5238780-5238863,5238969-5239040,
           5239153-5239248,5239345-5239410,5239537-5239642,
           5239749-5239900,5240238-5240433,5240791-5240879
          Length = 570

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3

Query: 324 LEQYASKEIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESNYGLDKPE 479
           L +  S++ FA GLI    T+ R+   H+A     K  E+G+ S   L +P+
Sbjct: 502 LAEQVSEDNFARGLIFPPFTNIRKISAHIAAKVAAKAYELGLASR--LPRPD 551


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,739,085
Number of Sequences: 37544
Number of extensions: 361932
Number of successful extensions: 705
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)