Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_J02
         (903 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    24   5.5  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           24   5.5  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           24   5.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.6  

>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 360 GLILGQMTDARENVIHLARTPEEKGSEIGIESNYGLDK 473
           GLI  +  D  E  + L+       ++ G+ + Y LDK
Sbjct: 191 GLIYQRCNDRLETAVQLSWASGSNATKFGMGAKYDLDK 228


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 360 GLILGQMTDARENVIHLARTPEEKGSEIGIESNYGLDK 473
           GLI  +  D  E  + L+       ++ G+ + Y LDK
Sbjct: 191 GLIYQRCNDRLETAVQLSWASGSNATKFGMGAKYDLDK 228


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 360 GLILGQMTDARENVIHLARTPEEKGSEIGIESNYGLDK 473
           GLI  +  D  E  + L+       ++ G+ + Y LDK
Sbjct: 191 GLIYQRCNDRLETAVQLSWASGSNATKFGMGAKYDLDK 228


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 595  KMSLKILIALVNYDQPLTTYIKA*VSMSI 681
            K++LK+   ++NYD+  T   K  V + I
Sbjct: 925  KLNLKVFFLIMNYDRGATQVSKQTVQIPI 953


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,960
Number of Sequences: 2352
Number of extensions: 15390
Number of successful extensions: 51
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)