Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_J02
         (903 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ529299-1|ABF71985.1|  431|Homo sapiens TTG1A protein.                66   2e-10
DQ323046-1|ABC50092.1|  454|Homo sapiens TTG1 protein.                 65   4e-10
BC003397-1|AAH03397.2|  454|Homo sapiens chromosome 1 open readi...    65   4e-10
AY854248-1|AAW30011.1|  454|Homo sapiens odorant response abnorm...    65   4e-10
AL596220-3|CAI13121.1|  454|Homo sapiens chromosome 1 open readi...    65   4e-10
AK000512-1|BAA91218.1|  335|Homo sapiens protein ( Homo sapiens ...    65   4e-10
AK026086-1|BAB15356.1|  373|Homo sapiens protein ( Homo sapiens ...    33   1.9  

>DQ529299-1|ABF71985.1|  431|Homo sapiens TTG1A protein.
          Length = 431

 Score = 66.1 bits (154), Expect = 2e-10
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
 Frame = +3

Query: 282 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 458
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP  KG     E +
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPP-KG-----EQS 54

Query: 459 YGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 638
             L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 55  ENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDSQ--NALRR 110

Query: 639 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTXVLTCXSF 764
            +  + K  SIN     N      +ER+ LH+  ST  + C ++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTY 152


>DQ323046-1|ABC50092.1|  454|Homo sapiens TTG1 protein.
          Length = 454

 Score = 64.9 bits (151), Expect = 4e-10
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
 Frame = +3

Query: 282 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 458
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP ++      E +
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54

Query: 459 YGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 638
             L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 55  ENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110

Query: 639 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTXVLTCXSF 764
            +  + K  SIN     N      +ER+ LH+  ST  + C ++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTY 152


>BC003397-1|AAH03397.2|  454|Homo sapiens chromosome 1 open reading
           frame 27 protein.
          Length = 454

 Score = 64.9 bits (151), Expect = 4e-10
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
 Frame = +3

Query: 282 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 458
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP ++      E +
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54

Query: 459 YGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 638
             L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 55  ENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110

Query: 639 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTXVLTCXSF 764
            +  + K  SIN     N      +ER+ LH+  ST  + C ++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTY 152


>AY854248-1|AAW30011.1|  454|Homo sapiens odorant response abnormal
           4 protein protein.
          Length = 454

 Score = 64.9 bits (151), Expect = 4e-10
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
 Frame = +3

Query: 282 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 458
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP ++      E +
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54

Query: 459 YGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 638
             L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 55  ENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110

Query: 639 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTXVLTCXSF 764
            +  + K  SIN     N      +ER+ LH+  ST  + C ++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTY 152


>AL596220-3|CAI13121.1|  454|Homo sapiens chromosome 1 open reading
           frame 27 protein.
          Length = 454

 Score = 64.9 bits (151), Expect = 4e-10
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
 Frame = +3

Query: 282 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 458
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP ++      E +
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54

Query: 459 YGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 638
             L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 55  ENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110

Query: 639 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTXVLTCXSF 764
            +  + K  SIN     N      +ER+ LH+  ST  + C ++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTY 152


>AK000512-1|BAA91218.1|  335|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20505 fis, clone KAT09459. ).
          Length = 335

 Score = 64.9 bits (151), Expect = 4e-10
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
 Frame = +3

Query: 282 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 458
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP ++      E +
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54

Query: 459 YGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 638
             L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 55  ENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110

Query: 639 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTXVLTCXSF 764
            +  + K  SIN     N      +ER+ LH+  ST  + C ++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTY 152


>AK026086-1|BAB15356.1|  373|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22433 fis, clone HRC09172. ).
          Length = 373

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
 Frame = +3

Query: 546 MLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYKGLSINEYMFGNCPYS--NERLI 719
           MLPGG+ V G+F+ +  ++  D    + LR  +  + K  SIN     N      +ER+ 
Sbjct: 1   MLPGGLLVLGVFIITTLELANDFQ--NALRRLMFAVEK--SINRKRLWNFTEEEVSERVT 56

Query: 720 LHMSTSTXVLTCXSF 764
           LH+  ST  + C ++
Sbjct: 57  LHICASTKKIFCRTY 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,733,053
Number of Sequences: 237096
Number of extensions: 2108460
Number of successful extensions: 3694
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3688
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)