Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_I24
         (1412 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    29   0.25 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   5.3  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 0.25
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +3

Query: 537 GGXGXGQXGRXRXEGXGXEEXGEDGRXGXNXXGSGER 647
           GG   G+ GR    G G    G DG  G    G G+R
Sbjct: 66  GGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDR 102



 Score = 25.8 bits (54), Expect = 3.0
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = +3

Query: 465 GXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEG 581
           G    GG GGG         R   GG G G  G    +G
Sbjct: 68  GRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNGDG 106


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 5.3
 Identities = 21/88 (23%), Positives = 23/88 (26%)
 Frame = +3

Query: 372 GXXXXGXXGGEKKRRXXFXXXXKRRGGKKKXGXXXEGGEGGGXXEXXXXEKRXXXGGXGX 551
           G    G  GG            K+   K+       GG GGG              G G 
Sbjct: 169 GGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228

Query: 552 GQXGRXRXEGXGXEEXGEDGRXGXNXXG 635
           G  GR R       E    G  G    G
Sbjct: 229 GGGGRDRDHRDRDREREGGGNGGGGGGG 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.304    0.133    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 356,090
Number of Sequences: 2352
Number of extensions: 2744
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 163777185
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)