Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_I24
(1412 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 37 0.058
BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p pro... 36 0.18
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 34 0.41
AY075308-1|AAL68175.1| 157|Drosophila melanogaster AT31822p pro... 33 1.2
AE013599-1073|AAF58807.2| 157|Drosophila melanogaster CG12907-P... 33 1.2
AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-P... 32 1.6
X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein. 31 3.8
X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein. 30 6.7
X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP pro... 30 8.8
X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous ... 30 8.8
BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p pro... 30 8.8
AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-P... 30 8.8
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 37.1 bits (82), Expect = 0.058
Identities = 30/98 (30%), Positives = 32/98 (32%), Gaps = 1/98 (1%)
Frame = +3
Query: 459 KXGXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEGXGXEEXGEDGRXGXNXXGS 638
K G GG GGG R GG G G G R G G + G G G G
Sbjct: 3 KPGFSPRGGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGR--GG 60
Query: 639 GERREKXXXGXXERXXEXXEGEQKGXAR-XGKXGXXGR 749
G R G G + G R G G GR
Sbjct: 61 GGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGR 98
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Frame = +3
Query: 447 GGKKKXGXXXEGGEGGGXXEXXXXEK-------RXXXGGXGXGQXGRXRXEGXGXEEXGE 605
GG G GG GGG + R GG G G+ G R G G
Sbjct: 15 GGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAF 74
Query: 606 DGRXGXNXXGSGER 647
GR G G G R
Sbjct: 75 GGRGGGGGRGGGGR 88
>BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p
protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.18
Identities = 27/93 (29%), Positives = 29/93 (31%)
Frame = +3
Query: 459 KXGXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEGXGXEEXGEDGRXGXNXXGS 638
K G GG GGG R GG G G G R G G + G G G
Sbjct: 3 KPGFSPRGGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGG-FGGGRGAF 61
Query: 639 GERREKXXXGXXERXXEXXEGEQKGXARXGKXG 737
G R G R G +G G G
Sbjct: 62 GGRGGGGGRGGGGRGGGGRGGGGRGGGAGGFKG 94
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 34.3 bits (75), Expect = 0.41
Identities = 28/91 (30%), Positives = 30/91 (32%), Gaps = 1/91 (1%)
Frame = +3
Query: 480 GGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEGXGXEEXGEDGRXGXNXXGSGERREKX 659
GG GGG R GG G G G R G G + G G G G G R
Sbjct: 17 GGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGR--GGGGRGGGG 74
Query: 660 XXGXXERXXEXXEGEQKGXAR-XGKXGXXGR 749
G G + G R G G GR
Sbjct: 75 GGGRGAFGGRGGGGGRGGGGRGGGGRGGGGR 105
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Frame = +3
Query: 447 GGKKKXGXXXEGGEGGGXXEXXXXEK-------RXXXGGXGXGQXGRXRXEGXGXEEXGE 605
GG G GG GGG + R GG G G+ G R G G
Sbjct: 22 GGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAF 81
Query: 606 DGRXGXNXXGSGER 647
GR G G G R
Sbjct: 82 GGRGGGGGRGGGGR 95
>AY075308-1|AAL68175.1| 157|Drosophila melanogaster AT31822p
protein.
Length = 157
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +3
Query: 444 RGGKKKXGXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEGXGXEEXGEDGRXG 620
RGG++ EGG+G E R GG G G EG G E G++G G
Sbjct: 52 RGGREIAQGEGEGGQGAREEAEGKREGRKGEGGEGEEGEGE---EGEGKEGEGKEGEGG 107
>AE013599-1073|AAF58807.2| 157|Drosophila melanogaster CG12907-PA
protein.
Length = 157
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +3
Query: 444 RGGKKKXGXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEGXGXEEXGEDGRXG 620
RGG++ EGG+G E R GG G G EG G E G++G G
Sbjct: 52 RGGREIAQGEGEGGQGAREEAEGKREGRKGEGGEGEEGEGE---EGEGKEGEGKEGEGG 107
>AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-PB,
isoform B protein.
Length = 325
Score = 32.3 bits (70), Expect = 1.6
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = +3
Query: 450 GKKKXGXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEGXGXEEXGEDGRXGXNX 629
G G +GG GGG GG G G G G G G G N
Sbjct: 259 GGGSGGWNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGQGGN- 317
Query: 630 XGSGERR 650
G G RR
Sbjct: 318 MGGGNRR 324
>X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein.
Length = 326
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Frame = +3
Query: 450 GKKKXGXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEG-XGXEEXGEDGRXGXN 626
G G +GG GGG GG G G G G G G G G N
Sbjct: 259 GGGSGGWNQQGGSGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGGNGGGGGGGQGGN 318
Query: 627 XXGSGERR 650
G G RR
Sbjct: 319 -MGGGNRR 325
>X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein.
Length = 386
Score = 30.3 bits (65), Expect = 6.7
Identities = 24/111 (21%), Positives = 33/111 (29%)
Frame = +3
Query: 450 GKKKXGXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEGXGXEEXGEDGRXGXNX 629
G G +GG GGG GG G G G G G +G G
Sbjct: 259 GGGSGGWNQQGGSGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNG----SWGGNGGGGGGG 314
Query: 630 XGSGERREKXXXGXXERXXEXXEGEQKGXARXGKXGXXGRXXKXKXXGEXG 782
G G ++ G +R ++ G G + + G G
Sbjct: 315 GGFGNEYQQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNKGNQGGGQGFAG 365
>X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP
protein) protein.
Length = 386
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/111 (21%), Positives = 33/111 (29%)
Frame = +3
Query: 450 GKKKXGXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEGXGXEEXGEDGRXGXNX 629
G G +GG GGG GG G G G G G +G G
Sbjct: 259 GGGSGGWNQQGGTGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNG----SWGGNGGGGGGG 314
Query: 630 XGSGERREKXXXGXXERXXEXXEGEQKGXARXGKXGXXGRXXKXKXXGEXG 782
G G ++ G +R ++ G G + + G G
Sbjct: 315 GGFGNEYQQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNKGNQGGGQGFAG 365
>X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 386
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/111 (21%), Positives = 33/111 (29%)
Frame = +3
Query: 450 GKKKXGXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEGXGXEEXGEDGRXGXNX 629
G G +GG GGG GG G G G G G +G G
Sbjct: 259 GGGSGGWNQQGGTGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNG----SWGGNGGGGGGG 314
Query: 630 XGSGERREKXXXGXXERXXEXXEGEQKGXARXGKXGXXGRXXKXKXXGEXG 782
G G ++ G +R ++ G G + + G G
Sbjct: 315 GGFGNEYQQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNKGNQGGGQGFAG 365
>BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p
protein.
Length = 385
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/111 (21%), Positives = 33/111 (29%)
Frame = +3
Query: 450 GKKKXGXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEGXGXEEXGEDGRXGXNX 629
G G +GG GGG GG G G G G G +G G
Sbjct: 259 GGGSGGWNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGG-----GNSNGSWGGNGGGGGGG 313
Query: 630 XGSGERREKXXXGXXERXXEXXEGEQKGXARXGKXGXXGRXXKXKXXGEXG 782
G G ++ G +R ++ G G + + G G
Sbjct: 314 GGFGNEYQQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNKGNQGGGQGFAG 364
>AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-PA,
isoform A protein.
Length = 385
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/111 (21%), Positives = 33/111 (29%)
Frame = +3
Query: 450 GKKKXGXXXEGGEGGGXXEXXXXEKRXXXGGXGXGQXGRXRXEGXGXEEXGEDGRXGXNX 629
G G +GG GGG GG G G G G G +G G
Sbjct: 259 GGGSGGWNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGG-----GNSNGSWGGNGGGGGGG 313
Query: 630 XGSGERREKXXXGXXERXXEXXEGEQKGXARXGKXGXXGRXXKXKXXGEXG 782
G G ++ G +R ++ G G + + G G
Sbjct: 314 GGFGNEYQQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNKGNQGGGQGFAG 364
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.304 0.133 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,452,237
Number of Sequences: 53049
Number of extensions: 204663
Number of successful extensions: 472
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 7762261392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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