Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_I18
(877 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 31 0.28
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 4.6
SPBC19G7.09 |ulp1||SUMO deconjugating enzyme Ulp1|Schizosaccharo... 27 4.6
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 27 4.6
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 26 6.1
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 26 6.1
SPBC215.14c |vps20||vacuolar sorting protein Vps20|Schizosacchar... 26 8.1
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 8.1
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 26 8.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 8.1
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 30.7 bits (66), Expect = 0.28
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +3
Query: 192 ALIASSVMALYRVPLHR---MKTARTHFHEVGTELELLRL--KYDVTGPSPEPLSNYLDA 356
AL AS A VP R + + + V +LE ++ K D +G L Y DA
Sbjct: 15 ALQASVASAYSEVPGKRSVVLNLQHSQYDHVARKLERTKVLNKRDSSGYPVLDLE-YTDA 73
Query: 357 Q-YYGVISIGTPPQSFKVVFDTGSSNLWVPSK 449
Y+ +++G+ + + + DTGS WV +K
Sbjct: 74 GGYFANLTLGSNERVYSLTLDTGSPYTWVTAK 105
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 4.6
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -1
Query: 730 GVTWSTAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERLPEP 551
G+TWST + +NL+A+K S SAN PP S+ K P P
Sbjct: 268 GLTWSTKQDAVPLKTALANLSASKTQAPSSGDSANGGLPPPPPPPPPSNDFWKDSNEPAP 327
>SPBC19G7.09 |ulp1||SUMO deconjugating enzyme
Ulp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 568
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 655 SPGSDTASANVWRRTLSPPTVTSSVER---KPERLPEPYCIANWVPFATY 515
SP SDT S N+ LSP + S R +P R + ++N + A +
Sbjct: 143 SPASDTHSQNIHDEALSPSSFRVSRSRYFPRPHRSSKNLSVSNRLQLAVF 192
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 452 LFGRHPEVGGSGVEYHLERLRRRADTDHSVVLSIK 348
+FG + E GG G +R RR +D H +S++
Sbjct: 95 MFGMNFEAGGPGKNVPRDRKRRGSDVIHDYEISLE 129
>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 165 MGKISLFFLALIASSVMALYRVPLHRMKTARTH 263
MGK+S+ + A IAS+ + ++ P +R H
Sbjct: 1 MGKLSMLYNAAIASTFVKVFLFPSYRSTDFEVH 33
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 668 GHEGKPGLRHGLGERL 621
G EGKPG+ G+GE L
Sbjct: 72 GTEGKPGVSRGVGEEL 87
>SPBC215.14c |vps20||vacuolar sorting protein
Vps20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 226
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 93 KIEHCDRNVLSIEKQRQKLKEF 28
KI DR++LSI++QR KL +
Sbjct: 7 KINDKDRSILSIKEQRDKLLRY 28
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 702 STIAVDHVTPXVRQHGGSGTRAAPSSRSISTGTPG 806
+T+ V+ +P GG A S+R+ ++G PG
Sbjct: 321 TTVTVEEESPIALGQGGVTHEATTSARASASGIPG 355
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 691 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSV 581
PR+ A++K + S TAS ++SP + SSV
Sbjct: 96 PRLSKPYASSKLAASSRTASYQAMSYSVSPTSTNSSV 132
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -1
Query: 736 TXGVTWSTAIVLKAIPRIPSNLAATKASPGS--DTASANVWRRTLSPPTVTSSV 581
T ++ S + P + S + T + GS D+A+++ W S +TSSV
Sbjct: 888 TTSLSTSIPVTSSVAPAVTSTGSETSSVVGSGTDSATSSSWTAETSSSAITSSV 941
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,298,280
Number of Sequences: 5004
Number of extensions: 67295
Number of successful extensions: 193
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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