Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_I17
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0218 + 18219956-18220555                                         32   0.55 
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.7  
12_01_0816 + 7502669-7503145                                           29   5.1  
06_01_0438 + 3110703-3111945,3112486-3113057                           29   6.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.9  
03_04_0061 - 16949038-16950006                                         28   8.9  

>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 32.3 bits (70), Expect = 0.55
 Identities = 22/63 (34%), Positives = 26/63 (41%)
 Frame = -3

Query: 796 NGGFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQVYGKRQGRNRRAHEGASRGKR 617
           NGG     ++ A    +T  P     R R   R E  G    KR+GR R    G  RGKR
Sbjct: 81  NGGLTEGEEVAARPREKTARPDG--ARARRERRLEAAGAE--KREGRRRGGSSGGLRGKR 136

Query: 616 LVS 608
             S
Sbjct: 137 RAS 139


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +3

Query: 516 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 674
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>12_01_0816 + 7502669-7503145
          Length = 158

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 815 RPSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERR 684
           R SG  +R V    PAW ER   + ++ +V  E+A      ERR
Sbjct: 8   RSSGEGDRPVARWWPAWQEREKESLESSAVEGERATAEVGSERR 51


>06_01_0438 + 3110703-3111945,3112486-3113057
          Length = 604

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -1

Query: 150 HCILVVVCPNSSMYLIMSGSN*PSXKGRSAAAVP 49
           HC + +VC +S+  L++S    P+    ++AA+P
Sbjct: 64  HCFVEIVCADSAGRLLLSAKPRPAPAATTSAALP 97


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 296 NESAN---ARGEAVCVLGALPLPRSLTRCAR 379
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 598 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 714
           RT+K PG+   ++PRA+  + P  Y   VR +   +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,436,212
Number of Sequences: 37544
Number of extensions: 558139
Number of successful extensions: 1664
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)