Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_I15
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 45 9e-05
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 43 3e-04
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 38 0.013
AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 31 0.88
AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical... 31 1.2
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 29 3.5
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 29 6.2
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +2
Query: 191 MVTVGPDPAQVTCPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNS 370
++ + P ++ CP C ++T+ + T I P+C+ SC +
Sbjct: 65 IIRLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCLRSCKDI 124
Query: 371 DHYCPNCNAYIGTYTR 418
H CPNC A IG + R
Sbjct: 125 IHTCPNCRAMIGVHRR 140
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 44.8 bits (101), Expect = 9e-05
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +2
Query: 218 QVTCPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNSDHYCPNCNA 397
+ TC SC V T + T I+ P+C+DSC ++ HYCP CNA
Sbjct: 90 ETTCYSCGKYVHTLPKFVIGSLTWIV-FILVLICFFPLAFVPFCLDSCKDAHHYCPRCNA 148
Query: 398 YIGTYTR*F 424
+G R F
Sbjct: 149 LLGIKKRIF 157
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 43.2 bits (97), Expect = 3e-04
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +2
Query: 341 PYCMDSCMNSDHYCPNCNAYIGTYTR 418
P+C+++ +++HYCP+C A+IGTY R
Sbjct: 80 PFCVETFKDAEHYCPSCRAWIGTYRR 105
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 37.5 bits (83), Expect = 0.013
Identities = 18/64 (28%), Positives = 24/64 (37%)
Frame = +2
Query: 227 CPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNSDHYCPNCNAYIG 406
CP C ++MT +TT +I C D + DH CPNC +
Sbjct: 36 CPKCQTTIMTSVTTHIGMCWWLICFFGTFLFCWPILIC-LCFDVSKDVDHNCPNCGLLLA 94
Query: 407 TYTR 418
T R
Sbjct: 95 TSNR 98
>AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical
protein B0348.2 protein.
Length = 86
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/65 (23%), Positives = 26/65 (40%)
Frame = +2
Query: 209 DPAQVTCPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNSDHYCPN 388
+P QV C C + +T+ T+ ++ C DS ++ HYCP+
Sbjct: 17 EPHQVFCQKCQCNQVTRTETQLGACWWVVFIIGCLLFWPICYWL--CCDSSKDTMHYCPS 74
Query: 389 CNAYI 403
C +
Sbjct: 75 CGTLL 79
>AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical
protein Y87G2A.18 protein.
Length = 118
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Frame = +2
Query: 212 PAQVTCPSCHASVMTKITTKASTKTHII------AXXXXXXXXXXXXXXPYCMDSCMNSD 373
P ++ CP C +++ I A II P+ +D ++ +
Sbjct: 43 PIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCCVPFFLDQLLDVN 102
Query: 374 HYCPNCNAYIGTYTR 418
H CP C ++G + R
Sbjct: 103 HSCPACKKFLGRFNR 117
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/70 (22%), Positives = 28/70 (40%)
Frame = +2
Query: 209 DPAQVTCPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNSDHYCPN 388
+P CP C+ +V T++ + + +C+D +S H CPN
Sbjct: 65 EPYTEFCPRCNTNVCTRVERTMGFCSWTMLFLGLFVFFPLLCC--FCLDGFKDSRHSCPN 122
Query: 389 CNAYIGTYTR 418
C + +Y R
Sbjct: 123 CGTIL-SYKR 131
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/64 (26%), Positives = 21/64 (32%)
Frame = +2
Query: 227 CPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNSDHYCPNCNAYIG 406
CP C SV T+ T II C S + H+CPNC +
Sbjct: 88 CPRCQTSVTTRTVHSIGTCWWIILFIGVFVFCWPILYCLCCAGS-KDVKHFCPNCGTMLA 146
Query: 407 TYTR 418
R
Sbjct: 147 CKKR 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,118,254
Number of Sequences: 27780
Number of extensions: 311392
Number of successful extensions: 923
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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