Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_I09
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0310 - 16669565-16669822,16670558-16670794 173 2e-43
03_01_0290 + 2246791-2247027,2248089-2248346 173 2e-43
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 31 0.93
04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484 30 2.1
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 30 2.8
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 30 2.8
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 30 2.8
01_06_1794 - 39919363-39920025 29 3.8
01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999 29 3.8
09_01_0142 - 2103224-2103864,2104264-2104399 29 5.0
08_01_0283 - 2304024-2304111,2304224-2304343,2304594-2304715,230... 29 5.0
01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142... 29 6.6
09_02_0307 + 7131031-7131326,7131414-7131560,7132579-7132711,713... 28 8.7
05_03_0549 - 15349259-15349346,15349466-15349585,15349899-153500... 28 8.7
05_01_0167 - 1153778-1153927,1154006-1154797,1155602-1156408,115... 28 8.7
03_05_0435 - 24259864-24260206,24260302-24260467,24261175-242612... 28 8.7
03_02_0263 - 6948618-6948818,6948909-6948971,6949078-6949146,694... 28 8.7
02_01_0391 + 2838471-2838794,2838892-2839028,2841155-2841631,284... 28 8.7
01_01_0990 + 7847066-7847478,7847713-7848679 28 8.7
>10_08_0310 - 16669565-16669822,16670558-16670794
Length = 164
Score = 173 bits (420), Expect = 2e-43
Identities = 82/158 (51%), Positives = 110/158 (69%)
Frame = +2
Query: 89 MTNSKGYRRGTRXLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 268
M G R TR LFAR FR G IPL+TY++ YK+G+ VD++ NGAV KGMPHK YHG+
Sbjct: 1 MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGR 60
Query: 269 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 448
TGRV+NVT A+GV +NK+V RII KRI++RVEHV+ S+C ++F R +N++L +AK
Sbjct: 61 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAK 120
Query: 449 AAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFV 562
A G+ ++ KRQP PK +V G + PIPY+ V
Sbjct: 121 ARGEVISTKRQPQGPKPGFMVEGATLET-VTPIPYDVV 157
>03_01_0290 + 2246791-2247027,2248089-2248346
Length = 164
Score = 173 bits (420), Expect = 2e-43
Identities = 82/158 (51%), Positives = 109/158 (68%)
Frame = +2
Query: 89 MTNSKGYRRGTRXLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 268
M G R TR LFAR FR G IPL+TY++ YK+GD VD++ NGAV KGMPHK YHG+
Sbjct: 1 MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
Query: 269 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 448
TGRV+NVT A+GV +NK+V RII KRI++RVEHV+ S+C ++ R +N++L +AK
Sbjct: 61 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKADAK 120
Query: 449 AAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFV 562
A G+ ++ KRQP PK +V G + PIPY+ V
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATLET-VTPIPYDVV 157
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 31.5 bits (68), Expect = 0.93
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +1
Query: 214 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC*ACQ 378
+++W C SK YA QS WK S++ C RCDC SR+D H+ C A
Sbjct: 117 EKKWKCDKCSKRYAVQS-DWKAHSKI---CGTREYRCDCGTLFSRRDSFITHRAFCDA-- 170
Query: 379 ALQVQTRLP 405
Q +RLP
Sbjct: 171 LAQESSRLP 179
>04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484
Length = 543
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +2
Query: 269 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 448
T R NV +IV VRGRI+P I ++H + K+ +EN L+ +
Sbjct: 409 TNRHLNVQPPPQRIIVKGTVRGRIVPPAIVSSLQHQRQQG------KQCQENNSSLQLQR 462
Query: 449 AAGKTVNLKRQPAP-PKAAHIVSGTEKPVLLAPI 547
+Q +P P + IVS + P +API
Sbjct: 463 GGTLLRQHPQQVSPAPGRSTIVSSSNAP-RIAPI 495
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 29.9 bits (64), Expect = 2.8
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +1
Query: 202 HCRH--QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQY 360
+CR +++W C SK YA QS WK S+ C RCDC SR+D H+
Sbjct: 115 YCRKHGEKKWRCDKCSKRYAVQS-DWKAHSKT---CGTREYRCDCGTLFSRRDSFITHRA 170
Query: 361 PC*ACQALQVQTRLP 405
C A Q R+P
Sbjct: 171 FCDA--LAQENARMP 183
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +1
Query: 214 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQAL 384
+++W C SK YA QS WK ++ RCDC SR+D H+ C A
Sbjct: 121 EKKWKCDKCSKKYAVQS-DWKAHTKTCGSREY-RCDCGTLFSRRDSFITHRAFCDALAEE 178
Query: 385 QVQTRLP*ESQRE*EATEGSQGCRQDRQP 471
+ R + + T S G + P
Sbjct: 179 SAKARAAPPPPADEDGTSASAGAPPPQAP 207
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 214 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 366
+++W C SK YA QS WK +++ C RCDC SRKD H+ C
Sbjct: 139 EKKWKCDRCSKKYAVQS-DWKAHTKI---CGTKEYRCDCGTIFSRKDSFITHRAFC 190
>01_06_1794 - 39919363-39920025
Length = 220
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 410 RVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPI 547
R ++ ++ EA AAG + KRQP PP SG A +
Sbjct: 27 RQQQQQQQQYEAAAAGDKTSAKRQPPPPSRLKKTSGRNDDAATAAV 72
>01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999
Length = 764
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Frame = +1
Query: 169 LHVHESVQSWRHCRHQRQWCSSKGYAT------QSIPWKDRSRVQRDCSCSRCDCQQACS 330
LH H+ R C+ R S T K ++ CSCS+ D +CS
Sbjct: 232 LHTHQVTDENRQCKSARGMLSHLDNYTGLNSDHAGKKLKGHLSIEEPCSCSKDDTDSSCS 291
Query: 331 RKDYTEAHQY 360
D A Y
Sbjct: 292 LADEHHARHY 301
>09_01_0142 - 2103224-2103864,2104264-2104399
Length = 258
Score = 29.1 bits (62), Expect = 5.0
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +2
Query: 269 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 448
T R NV +IV VRGRI+P I ++H + K+ +EN L+ +
Sbjct: 124 TNRHLNVQPPPQRIIVKGTVRGRIVPPAIVSSLQHQRQQG------KQCQENNSSLQLQR 177
Query: 449 AAGKTVNLKRQPAP-PKAAHIVSGTEKPVLLAPI 547
+ +Q +P P +VS + P +API
Sbjct: 178 GSMLLRQHPQQVSPAPGRPTVVSSSNAP-RIAPI 210
>08_01_0283 -
2304024-2304111,2304224-2304343,2304594-2304715,
2304824-2305096,2305454-2305558,2305635-2305851,
2306012-2306262,2306518-2306724,2307087-2307351,
2308655-2308749
Length = 580
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 196 WRHCRHQRQWCSSKGYATQSIPWKDRSRVQRDCS 297
W H QW YAT+ I W+ R+ V D S
Sbjct: 535 WISIGHSTQWLWYSVYATKQISWRTRALVISDWS 568
>01_01_0167 +
1422344-1424260,1424338-1424472,1424568-1424990,
1425183-1425252,1425356-1425495,1425620-1425679,
1425776-1425931,1426272-1426541
Length = 1056
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 188 YKVGDIVDIRGNGAVQKGMPHKVY 259
++ GDI+ I G+G+V K PH++Y
Sbjct: 623 FEDGDIIVIWGDGSVSKVGPHEIY 646
>09_02_0307 +
7131031-7131326,7131414-7131560,7132579-7132711,
7133115-7133207,7133421-7133717
Length = 321
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 437 KEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA 565
++A AA + L+ + A G E+P L P+PYE+ A
Sbjct: 77 RKAAAAAEADALRSAARQARTASSWYGDERPRWLGPVPYEYPA 119
>05_03_0549 -
15349259-15349346,15349466-15349585,15349899-15350020,
15350511-15350783,15351398-15351502,15351588-15351804,
15352031-15352281,15352582-15352776,15352881-15353139,
15354617-15354714
Length = 575
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 196 WRHCRHQRQWCSSKGYATQSIPWKDRSRVQRD 291
W H H QW YA++ W+ R V D
Sbjct: 530 WIHVGHSTQWLWYSVYASKQFSWRTRMLVVSD 561
>05_01_0167 -
1153778-1153927,1154006-1154797,1155602-1156408,
1156514-1156618,1156985-1157059,1157160-1157233,
1157388-1157450,1157549-1157647,1157704-1157811,
1157908-1157973,1158073-1158150,1158257-1158304,
1158381-1158440,1158527-1158610,1158902-1158949,
1159049-1159096,1161462-1161579
Length = 940
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 25 YREFLKILFSRSVKLCNTRLEDDELQGLPPRHQXLVRSQVPHTWNYSALHVHESVQ 192
Y ++ + S K CN L+D L+ V +Q H W+ ++ ESVQ
Sbjct: 304 YTSLMEHIISSQPKRCN-ELKDKSLEQTSEIGYSNVDNQSQHAWSLDIFNLQESVQ 358
>03_05_0435 -
24259864-24260206,24260302-24260467,24261175-24261241,
24261553-24261648,24261718-24261898,24262252-24262323,
24262393-24262505,24262596-24262817,24263262-24263910,
24264118-24264206,24265932-24266015,24266219-24266358,
24266522-24266573
Length = 757
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 229 SSKGYATQSIPWKDRSRVQRDC--SCSRCDCQQACSRKDYTE 348
+S G + Q P + R + Q D SC RC C+++ K Y E
Sbjct: 436 TSAGNSGQENPKRKRQKCQNDNVDSCKRCSCKKSKCLKLYCE 477
>03_02_0263 -
6948618-6948818,6948909-6948971,6949078-6949146,
6949232-6949297,6949380-6949526,6949608-6949702,
6949845-6950016,6952187-6952318,6953581-6953674,
6954067-6954184,6955884-6957057
Length = 776
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 283 QRDCSCSRCDCQQACSRKDYTEAHQYPC 366
Q C C C C + RKD A +Y C
Sbjct: 391 QDTCGCMMCKCIYSDQRKDIVLADKYTC 418
>02_01_0391 +
2838471-2838794,2838892-2839028,2841155-2841631,
2841719-2841999,2843009-2843051,2844094-2844148,
2845771-2845824,2846282-2846314,2846574-2846621,
2846885-2846950,2847286-2847426
Length = 552
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -2
Query: 385 GVLDMLNTDIDAL-RYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDV 209
GV+++ ++ +A RYN +A+ L + TES+ S + C++ + + + T
Sbjct: 239 GVIEIPYSEEEACCRYNETASILKELITESVGSEAIGVDCIADFRRLLRQMESMTSVCQE 298
Query: 208 YNVSN 194
Y +SN
Sbjct: 299 YIISN 303
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 214 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 366
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 98 EKKWKCDKCSKRYAVQS-DWKAHSKT---CGTREYRCDCGTLFSRRDSFITHRAFC 149
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,742,959
Number of Sequences: 37544
Number of extensions: 333980
Number of successful extensions: 1176
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -