Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_I07
         (1047 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.100
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   6.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   6.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 30.3 bits (65), Expect = 0.100
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +3

Query: 78  GPXGXGXPPPXGPXGGGGXKTXPXFXPPP 164
           GP G   PPP  P GG      P F PPP
Sbjct: 526 GPLG---PPPPPPPGGAVLNIPPQFLPPP 551



 Score = 27.9 bits (59), Expect = 0.53
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +3

Query: 102 PPXGPXGGGGXKTXPXFXPPPPXPPPG 182
           PP G    G   T     PPPP PP G
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPGG 538


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 6.6
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
 Frame = +3

Query: 111 GPXGGGGXKTXPXFX---PPPPXPP 176
           G  G GG  + P      PPPP PP
Sbjct: 737 GGSGAGGPSSSPPVMESIPPPPKPP 761


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 6.6
 Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
 Frame = +3

Query: 78  GPXGXGXPPPXGPXGGGGXKTXPXFXPPP--PXPPPG 182
           GP   G P    P   GG    P   P P  P  PPG
Sbjct: 199 GPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPG 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,236
Number of Sequences: 2352
Number of extensions: 6676
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 116341017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)