Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_I06
(882 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 179 8e-44
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 176 5e-43
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 149 1e-34
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 146 9e-34
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 122 1e-26
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 116 6e-25
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 114 2e-24
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 103 5e-21
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 99 7e-20
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 81 3e-14
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 75 3e-12
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 71 4e-11
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 70 9e-11
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 44 0.005
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 42 0.027
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 42 0.027
UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p - ... 42 0.027
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 41 0.036
UniRef50_Q7Q0M0 Cluster: ENSANGP00000014497; n=4; Coelomata|Rep:... 40 0.084
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 40 0.11
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 39 0.15
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 39 0.15
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 39 0.15
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 39 0.19
UniRef50_O67723 Cluster: 30S ribosomal protein S9; n=2; Aquifex ... 39 0.19
UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellul... 38 0.26
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 38 0.26
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 38 0.34
UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n... 38 0.45
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 37 0.59
UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n... 37 0.59
UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28; Bacteri... 37 0.78
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 37 0.78
UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial... 37 0.78
UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9; Bacteria... 37 0.78
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 37 0.78
UniRef50_UPI0000E7FB25 Cluster: PREDICTED: similar to mitochondr... 36 1.0
UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellula... 36 1.0
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 36 1.4
UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66; Bacteri... 35 2.4
UniRef50_Q5GS63 Cluster: 30S ribosomal protein S9; n=1; Wolbachi... 35 3.2
UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microsci... 34 4.2
UniRef50_Q5RBV9 Cluster: Putative uncharacterized protein DKFZp4... 34 4.2
UniRef50_Q0LQE8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular... 33 7.3
UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20; Bacteri... 33 7.3
UniRef50_A0DAX2 Cluster: Chromosome undetermined scaffold_43, wh... 33 9.6
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 179 bits (436), Expect = 8e-44
Identities = 83/105 (79%), Positives = 93/105 (88%)
Frame = +3
Query: 192 LSPDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 371
+ P EP+LLLGKE+F+ VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVD
Sbjct: 42 IEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVD 101
Query: 372 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
EASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 102 EASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
Score = 85.0 bits (201), Expect = 2e-15
Identities = 35/46 (76%), Positives = 45/46 (97%)
Frame = +2
Query: 83 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 220
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKL 51
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 176 bits (429), Expect = 5e-43
Identities = 81/94 (86%), Positives = 90/94 (95%)
Frame = +3
Query: 225 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 404
EPILLLGKE+F+ VDIR+ VKGGG+VAQ+YAIRQAISKAL+A+YQKYVDE SKKEIKD L
Sbjct: 55 EPILLLGKERFAGVDIRIRVKGGGNVAQIYAIRQAISKALVAYYQKYVDEQSKKEIKDTL 114
Query: 405 VQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
+QYDR+LLVADPRRCEPKKFGGPGARARYQKSYR
Sbjct: 115 IQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
Score = 80.6 bits (190), Expect = 5e-14
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +2
Query: 71 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 220
A +E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ +EP L+YKL
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKL 53
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 149 bits (360), Expect = 1e-34
Identities = 68/94 (72%), Positives = 81/94 (86%)
Frame = +3
Query: 225 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 404
EP+L++G +KF+ VDIRV V GGGH +QVYAIRQAI+K+L+A+YQKYVDE SK ++K
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQAIAKSLVAYYQKYVDEHSKNQLKQAF 121
Query: 405 VQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
VQYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 122 VQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 146 bits (353), Expect = 9e-34
Identities = 68/111 (61%), Positives = 85/111 (76%)
Frame = +3
Query: 174 GAHWTWLSPDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAF 353
G+ T + P+ EP+LL+G +KFS +DIRV V GGGHV+QVYAIRQAI+K L+A+
Sbjct: 33 GSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGLVAY 92
Query: 354 YQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
+QKYVDE SK E+K YDR+LL+AD RR EPKKFGG GAR+R+QKSYR
Sbjct: 93 HQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 143
Score = 60.1 bits (139), Expect = 7e-08
Identities = 24/45 (53%), Positives = 37/45 (82%)
Frame = +2
Query: 86 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 220
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LVEP +L++K+
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKV 48
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 122 bits (294), Expect = 1e-26
Identities = 57/103 (55%), Positives = 77/103 (74%)
Frame = +3
Query: 198 PDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEA 377
P+ T SEPI++LG+ F +D+ + V GGGHV+Q+YA+RQAIS+ ++A + DEA
Sbjct: 59 PEILRTKVSEPIMILGESLFKGLDMNIKVAGGGHVSQIYAVRQAISRGVLASVK---DEA 115
Query: 378 SKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
++ E++ LV YDR L+V+DPRRCE KKFGG GARAR QKSYR
Sbjct: 116 ARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQKSYR 158
Score = 40.7 bits (91), Expect = 0.048
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 95 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 220
V G+KK + AVA+ K G G + VN PL LV P +L+ K+
Sbjct: 25 VHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKV 66
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 116 bits (280), Expect = 6e-25
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = +3
Query: 258 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 437
S VDIR+ V GGG +Q+YAIRQAI+K+L+A+Y KY D AS E++ + V YDR+LL+AD
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIAD 176
Query: 438 PRRCEPKKFGGPGARARYQKSYR 506
RR EPKKFGG GARAR QKSYR
Sbjct: 177 TRRSEPKKFGGHGARARRQKSYR 199
Score = 62.5 bits (145), Expect = 1e-08
Identities = 24/43 (55%), Positives = 37/43 (86%)
Frame = +2
Query: 92 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 220
+V FG+KKTATAVA+CK G G++R+NG+P+ LV+P +L++K+
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKV 47
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 114 bits (275), Expect = 2e-24
Identities = 54/103 (52%), Positives = 69/103 (66%)
Frame = +3
Query: 198 PDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEA 377
PD E I ++G + +S + I V V GGG V+Q YA RQAI+K LIAF+QKY +E
Sbjct: 47 PDTLRAKIMEAITVVGSKYYSRLRIDVAVHGGGQVSQAYAARQAIAKGLIAFFQKYHNEV 106
Query: 378 SKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
K +KD + YD+ LL+ADPRRCEPKK+G AR R+ KSYR
Sbjct: 107 EKAALKDKFLAYDKFLLIADPRRCEPKKWGRHSARTRFTKSYR 149
Score = 36.7 bits (81), Expect = 0.78
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 86 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVEPRLLQYKL 220
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKI 54
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 103 bits (248), Expect = 5e-21
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = +3
Query: 225 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 404
E I ++ + + +T K GG V++VYA+R A +KA++AFY Y DE K+EI+ L
Sbjct: 52 EIICIVEQANIKDLSFDITCKIGGDVSRVYAVRMAFAKAILAFYGTYFDEWKKQEIQKRL 111
Query: 405 VQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
+ +DR LVAD R+ EPKKFGGPGARARYQKSYR
Sbjct: 112 LDFDRFSLVADSRKREPKKFGGPGARARYQKSYR 145
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 99 bits (238), Expect = 7e-20
Identities = 45/94 (47%), Positives = 64/94 (68%)
Frame = +3
Query: 225 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 404
EP +LG + ++ + KGGG V+Q+YAIRQ+ISK L+ +Y KY+ + +K
Sbjct: 46 EPFFILGSNERLNLNFDIFSKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKY 105
Query: 405 VQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
+ YD+ LL++D R EPKK+GG GARAR+QKSYR
Sbjct: 106 LTYDKKLLISDVSRIEPKKYGGLGARARFQKSYR 139
Score = 44.0 bits (99), Expect = 0.005
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +2
Query: 95 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 220
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKI 44
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 81.4 bits (192), Expect = 3e-14
Identities = 42/103 (40%), Positives = 69/103 (66%), Gaps = 9/103 (8%)
Frame = +3
Query: 225 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQ---------KYVDEA 377
EP+L+ G+ S+VDIRV V+GGG + Q A+R AI++ L+ F++ + +D+
Sbjct: 50 EPLLIAGEGVRSLVDIRVRVEGGGVMGQADAVRMAIARGLVEFFRCEESDDELCRMMDKI 109
Query: 378 SKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
S ++++ +++DR++LV DPRR EP+K+ AR R+QKSYR
Sbjct: 110 S-RDLRTAFLEHDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 74.5 bits (175), Expect = 3e-12
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 192 LSPDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 371
+ P+ EP++L G+E ++ VDI V V+GGG + Q A R AI++AL V+
Sbjct: 36 IEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARAL-------VE 88
Query: 372 EASKKEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 506
+K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 89 WTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
Score = 45.2 bits (102), Expect = 0.002
Identities = 15/45 (33%), Positives = 32/45 (71%)
Frame = +2
Query: 86 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 220
++ +Q G++KTA A A + G G +R+NG+P++++EP + ++ +
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTI 45
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 70.9 bits (166), Expect = 4e-11
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +3
Query: 234 LLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 410
LLL KE+ + +DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 67 LLLDKEQLAGMDIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +2
Query: 50 VCCRFFYARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 220
+C + R +Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL
Sbjct: 6 LCLETCHLRTRWLQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKL 62
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 69.7 bits (163), Expect = 9e-11
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Frame = +3
Query: 264 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKY-------VDEASKKEIKDILVQYDRS 422
VDI V VKGGG + Q A IS+ALI + + + + ++++++ + +D+
Sbjct: 62 VDISVRVKGGGFMGQAGASATGISRALIGWTKSRREPRNHPLTKTAREDLRKRIGDFDKY 121
Query: 423 LLVADPRRCEPKKFGGPGARARYQKSYR 506
L+ D RR EPKKFGGPGAR R QKSYR
Sbjct: 122 LISGDARRKEPKKFGGPGARRRKQKSYR 149
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 77 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 169
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 44.0 bits (99), Expect = 0.005
Identities = 35/97 (36%), Positives = 48/97 (49%)
Frame = +3
Query: 216 NFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 395
+ +P++ G EK DI VTVKGGG Q A R I++AL+ + Y +K ++
Sbjct: 48 DLEQPLVATGTEKD--FDITVTVKGGGFTGQAGATRLGIARALLVASEDY-----RKGLR 100
Query: 396 DILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
+ LL D R E KK+G GAR Q S R
Sbjct: 101 AV------GLLTRDARIKERKKYGLRGARRAPQYSKR 131
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 41.5 bits (93), Expect = 0.027
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3
Query: 225 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAI 320
+PIL LGKE+F+ V I V V G G VAQ+YAI
Sbjct: 71 DPILPLGKERFARVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 41.5 bits (93), Expect = 0.027
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +3
Query: 222 SEPILLL-GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKD 398
S+P+LL + KF D + V GGG +Q AI AIS+AL F D K +K+
Sbjct: 51 SKPLLLTYNQNKF---DFYIKVSGGGINSQAEAISLAISRALCKF-----DINHKPILKE 102
Query: 399 ILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
++LL DPR E KK+G +R +Q S R
Sbjct: 103 ------QNLLTRDPRMVERKKYGKKKSRKNFQFSKR 132
>UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p -
Drosophila melanogaster (Fruit fly)
Length = 395
Score = 41.5 bits (93), Expect = 0.027
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +3
Query: 249 EKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLL 428
E VD+ V+GGG Q AIR I+ +L +F + + E+ + LL
Sbjct: 320 ELLGKVDVEANVEGGGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLL 369
Query: 429 VADPRRCEPKKFGGPGARARY 491
D RR E KKFG GAR +Y
Sbjct: 370 TRDYRRRERKKFGQEGARRKY 390
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 41.1 bits (92), Expect = 0.036
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 446
D+ TV GGG AQ AIR A++KAL +F + DE LL DPR
Sbjct: 327 DVTCTVSGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRV 376
Query: 447 CEPKKFGGPGARARY 491
E KK G GAR ++
Sbjct: 377 RERKKPGQEGARRKF 391
>UniRef50_Q7Q0M0 Cluster: ENSANGP00000014497; n=4; Coelomata|Rep:
ENSANGP00000014497 - Anopheles gambiae str. PEST
Length = 84
Score = 39.9 bits (89), Expect = 0.084
Identities = 28/85 (32%), Positives = 42/85 (49%)
Frame = +3
Query: 237 LLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYD 416
LL + + +D+ V GGG +Q A+R I+ AL +F + D+ ++ +
Sbjct: 5 LLFTKMYGKIDVTANVSGGGPSSQAGAVRWGIAMALRSFVDE--DQIARMRV-------- 54
Query: 417 RSLLVADPRRCEPKKFGGPGARARY 491
LL D RR E KK G GAR +Y
Sbjct: 55 AGLLTRDYRRRERKKPGQAGARRKY 79
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 39.5 bits (88), Expect = 0.11
Identities = 32/80 (40%), Positives = 38/80 (47%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 446
DI V VKGGG Q AIR I +ALI F ++K +L + L D R
Sbjct: 64 DINVVVKGGGFTGQAGAIRLGIVRALIKF---------NPDLKKLL--KTKKLTTRDKRA 112
Query: 447 CEPKKFGGPGARARYQKSYR 506
E KKFG GAR Q + R
Sbjct: 113 KERKKFGLYGARRAPQFTKR 132
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 39.1 bits (87), Expect = 0.15
Identities = 30/83 (36%), Positives = 40/83 (48%)
Frame = +3
Query: 258 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 437
S D+ TV+GGG Q AIR I++ALI +Y +E + ++ + D
Sbjct: 62 SRFDVYATVQGGGDSGQAGAIRHGITRALI----QYDEEGGEGGTWRSTLR-KAGFVTRD 116
Query: 438 PRRCEPKKFGGPGARARYQKSYR 506
PR E KK G GAR Q S R
Sbjct: 117 PRMVERKKVGLHGARRGTQFSKR 139
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 39.1 bits (87), Expect = 0.15
Identities = 31/93 (33%), Positives = 48/93 (51%)
Frame = +3
Query: 228 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILV 407
P+ +LG + D+ + V GGG QV A R +++A++ +K E K+E+K
Sbjct: 54 PLKMLGD--VNSFDLIIRVSGGGVQGQVIATRLGLARAVLQ--EK---EDMKQELKS--- 103
Query: 408 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
+ L DPR+ E KK+G AR +Q S R
Sbjct: 104 ---QGFLTRDPRKKERKKYGRKKARKSFQFSKR 133
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 39.1 bits (87), Expect = 0.15
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 446
D+ + V GGG Q AIR IS+AL +DE++K ++ L D R+
Sbjct: 68 DLYINVYGGGISGQSGAIRHGISRALFK-----LDESNK------MILRSNGFLTRDSRK 116
Query: 447 CEPKKFGGPGARARYQKSYR 506
E KKFG AR +Q S R
Sbjct: 117 VERKKFGQKKARKSFQFSKR 136
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 38.7 bits (86), Expect = 0.19
Identities = 35/94 (37%), Positives = 44/94 (46%)
Frame = +3
Query: 225 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 404
+P+ LL + DI TVKGGG Q AIR I++ALI DE K +K
Sbjct: 48 QPLELL--DSAETYDIYATVKGGGINGQAGAIRHGITRALIE-----SDETLKPALK--- 97
Query: 405 VQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
+ + D R+ E KK G AR R Q S R
Sbjct: 98 ---EAGFVTRDSRQVERKKLGLRKARKRPQFSKR 128
Score = 34.7 bits (76), Expect = 3.2
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 107 GRKKTATAVAYCKRGHGMLRVNGRPLD 187
GR+KT+TA + +G G + VNG+PLD
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLD 34
>UniRef50_O67723 Cluster: 30S ribosomal protein S9; n=2; Aquifex
aeolicus|Rep: 30S ribosomal protein S9 - Aquifex
aeolicus
Length = 147
Score = 38.7 bits (86), Expect = 0.19
Identities = 29/79 (36%), Positives = 40/79 (50%)
Frame = +3
Query: 270 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRC 449
I TV+GGG AQ AI ++KAL+ +++ L + LL D R
Sbjct: 80 IYATVRGGGISAQAEAIMYGVAKALLQH---------NPDLRPTLKK--AGLLTRDAREK 128
Query: 450 EPKKFGGPGARARYQKSYR 506
E KK+G GARA+Y+ S R
Sbjct: 129 ERKKYGQMGARAKYRWSKR 147
>UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellular
organisms|Rep: 30S ribosomal protein S9 - Rhizobium loti
(Mesorhizobium loti)
Length = 160
Score = 38.3 bits (85), Expect = 0.26
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Frame = +3
Query: 210 STNFSEPIL-------LLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYV 368
+T F+ P+L ++ + DI TV GGG Q A+R ISKAL +Y+ +
Sbjct: 66 ATYFARPVLQMILNQPIIASNRSGQYDIVATVVGGGLSGQAGAVRHGISKAL-TYYEPAL 124
Query: 369 DEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
KK L D R E KK+G AR +Q S R
Sbjct: 125 RAVLKK----------GGFLTRDSRVVERKKYGKAKARRSFQFSKR 160
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 38.3 bits (85), Expect = 0.26
Identities = 32/94 (34%), Positives = 42/94 (44%)
Frame = +3
Query: 225 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 404
+P++ G E D+RV V GGG Q AIR I++AL+ VD + +K
Sbjct: 50 QPLVETGTE--GQYDVRVNVDGGGFTGQAGAIRHGIARALL-----QVDPEYRPSLK--- 99
Query: 405 VQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
L D R E KK+G AR Q S R
Sbjct: 100 ---SAGFLTRDARMKERKKYGLKAARRAPQFSKR 130
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 37.9 bits (84), Expect = 0.34
Identities = 31/90 (34%), Positives = 39/90 (43%)
Frame = +3
Query: 237 LLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYD 416
L E F VD+ V V GGG Q AI I++AL A+ ++ + S
Sbjct: 123 LKATETFGKVDVWVRVTGGGTTGQTGAIVLGIARALEAYNNQFHETLSAGR--------- 173
Query: 417 RSLLVADPRRCEPKKFGGPGARARYQKSYR 506
L D R E KKFG AR +Q S R
Sbjct: 174 --FLTRDSRMVERKKFGFKKARKSFQFSKR 201
>UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlorella vulgaris|Rep: Chloroplast 30S ribosomal
protein S9 - Chlorella vulgaris (Green alga)
Length = 137
Score = 37.5 bits (83), Expect = 0.45
Identities = 28/80 (35%), Positives = 40/80 (50%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 446
D+ + V+GGG AQ A++ A+SKA + F+ +Y +K K LL D R
Sbjct: 69 DVHILVEGGGLSAQAQAVKLALSKAFVDFFPEY-----RKVFK------KPGLLTRDARI 117
Query: 447 CEPKKFGGPGARARYQKSYR 506
E +K+G AR Q S R
Sbjct: 118 KERRKYGLKKARKAPQFSKR 137
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 37.1 bits (82), Expect = 0.59
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +3
Query: 225 EPILLLG-KEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDI 401
EP+ L K +F+++ + VKGGG V QV AI+ I++AL F Y + K
Sbjct: 61 EPLHFLKLKNEFNLI---IKVKGGGLVGQVNAIKLGIARALCEFDLTYRNSLKLK----- 112
Query: 402 LVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
L DPR E KK+G AR Q S R
Sbjct: 113 ------GFLTRDPRCKERKKYGLKKARKAPQFSKR 141
>UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlamydomonas reinhardtii|Rep: Chloroplast 30S ribosomal
protein S9 - Chlamydomonas reinhardtii
Length = 191
Score = 37.1 bits (82), Expect = 0.59
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Frame = +3
Query: 192 LSPDCCSTN----FSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQ 359
+SPD TN F+ + G E D V VKGGG + Q AIR IS+AL
Sbjct: 64 VSPDLSLTNLESTFTNLMQFSGGENAVKFDTIVKVKGGGLMGQTEAIRLGISRALCLLST 123
Query: 360 KYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 461
A++ + +I + +A P + +K
Sbjct: 124 NTNPSANQNNLPNIYIPEGEGEALAIPNASDIRK 157
>UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28;
Bacteria|Rep: 30S ribosomal protein S9 - Idiomarina
loihiensis
Length = 130
Score = 36.7 bits (81), Expect = 0.78
Identities = 31/86 (36%), Positives = 42/86 (48%)
Frame = +3
Query: 249 EKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLL 428
EKF D+ +TV GGG Q AIR I++AL+ + DEA + ++ +
Sbjct: 59 EKF---DMYITVSGGGTTGQAGAIRHGITRALMQY-----DEALRGPLR------KEGYV 104
Query: 429 VADPRRCEPKKFGGPGARARYQKSYR 506
D R+ E KK G AR R Q S R
Sbjct: 105 TRDARQVERKKIGLHKARKRPQFSKR 130
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 36.7 bits (81), Expect = 0.78
Identities = 29/80 (36%), Positives = 37/80 (46%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 446
D+R +V GGGH Q A+ I+KALI F D ++ +K L D R
Sbjct: 81 DVRCSVAGGGHTGQAGAMVHGIAKALILF-----DSENRAVLK------TEKLNTRDSRS 129
Query: 447 CEPKKFGGPGARARYQKSYR 506
E KK G AR +Q S R
Sbjct: 130 VERKKPGRRKARRSFQFSKR 149
>UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=1; Schizosaccharomyces pombe|Rep: 40S
ribosomal protein S9, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 132
Score = 36.7 bits (81), Expect = 0.78
Identities = 28/75 (37%), Positives = 38/75 (50%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 446
++ TV GGG Q A+ AISK+LI + E S K+ V D ++ D R+
Sbjct: 64 NVWATVHGGGPTGQSGAVHAAISKSLI------LQEPSLKQ-----VIKDTHCVLNDKRK 112
Query: 447 CEPKKFGGPGARARY 491
E KK G P AR +Y
Sbjct: 113 VERKKTGQPKARKKY 127
>UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9;
Bacteria|Rep: 30S ribosomal protein S9 - Thermotoga
maritima
Length = 134
Score = 36.7 bits (81), Expect = 0.78
Identities = 27/80 (33%), Positives = 40/80 (50%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 446
D+ + V GGG Q A+R I++AL+ + Q ++ +L +Y +L DPR
Sbjct: 66 DLVIRVNGGGLSGQSGAVRLGIARALLQYDQ---------NLRPVLKKY--KMLTRDPRE 114
Query: 447 CEPKKFGGPGARARYQKSYR 506
E KK+G AR Q S R
Sbjct: 115 VERKKYGLKKARRAPQFSKR 134
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 36.7 bits (81), Expect = 0.78
Identities = 29/80 (36%), Positives = 38/80 (47%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 446
D+ + V GGG QV AIR A+++A+ ++ A KKE L DPR
Sbjct: 71 DLNLNVTGGGTTGQVGAIRHALARAICRIKPEF-RPAVKKE----------GFLTRDPRM 119
Query: 447 CEPKKFGGPGARARYQKSYR 506
E KK+G AR Q S R
Sbjct: 120 VERKKYGLHKARRGTQFSKR 139
>UniRef50_UPI0000E7FB25 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S9 isoform 1; n=1; Gallus gallus|Rep:
PREDICTED: similar to mitochondrial ribosomal protein S9
isoform 1 - Gallus gallus
Length = 340
Score = 36.3 bits (80), Expect = 1.0
Identities = 28/75 (37%), Positives = 36/75 (48%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 446
D TV GGG +Q AIR A +KAL + +V E ++ LL DPR
Sbjct: 271 DAICTVSGGGRSSQAGAIRLATAKAL----RSFVTET------EVEFMRQAGLLTVDPRV 320
Query: 447 CEPKKFGGPGARARY 491
E KK G GAR ++
Sbjct: 321 RERKKPGQEGARRKF 335
>UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellular
organisms|Rep: 30S ribosomal protein S9 - Mesorhizobium
sp. (strain BNC1)
Length = 160
Score = 36.3 bits (80), Expect = 1.0
Identities = 30/80 (37%), Positives = 36/80 (45%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 446
DI TV GGG Q A+R IS+AL FY+ + KK L D R
Sbjct: 92 DIVATVVGGGLSGQAGAVRHGISRAL-TFYEPELRAVLKK----------GGFLTRDSRV 140
Query: 447 CEPKKFGGPGARARYQKSYR 506
E KK+G AR +Q S R
Sbjct: 141 VERKKYGRAKARRSFQFSKR 160
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 35.9 bits (79), Expect = 1.4
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 228 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKY 365
P++L+ +E DI V V GGG AQ AI+ ISKAL+ + ++
Sbjct: 53 PLMLVKQE--GNFDIEVKVLGGGFAAQADAIKHGISKALVEYAPEF 96
>UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66;
Bacteria|Rep: 30S ribosomal protein S9 - Mycoplasma
pulmonis
Length = 136
Score = 35.1 bits (77), Expect = 2.4
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKY 365
DIRVTV+GGG Q AIR I++AL+ Y
Sbjct: 68 DIRVTVRGGGLAGQAGAIRLGIARALLEISADY 100
>UniRef50_Q5GS63 Cluster: 30S ribosomal protein S9; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: 30S
ribosomal protein S9 - Wolbachia sp. subsp. Brugia
malayi (strain TRS)
Length = 148
Score = 34.7 bits (76), Expect = 3.2
Identities = 30/80 (37%), Positives = 38/80 (47%)
Frame = +3
Query: 267 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 446
D+ TVKGGG Q A+ ISKAL Q ++ IL + L +
Sbjct: 80 DVFATVKGGGLSGQAGALAHGISKALSKISQ---------DLYSILRK--SGYLTRNSCV 128
Query: 447 CEPKKFGGPGARARYQKSYR 506
E KK+G GARA+YQ S R
Sbjct: 129 KERKKYGQRGARAKYQFSKR 148
>UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microscilla
marina ATCC 23134|Rep: 30S ribosomal protein S9 -
Microscilla marina ATCC 23134
Length = 172
Score = 34.3 bits (75), Expect = 4.2
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 201 DCCSTNFSEPILLL-GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKAL 344
D T +PI+ + EKF DIR V GGG Q A+R AI++AL
Sbjct: 46 DVLQTIVKQPIVAVDANEKF---DIRANVTGGGVAGQAEALRHAIARAL 91
>UniRef50_Q5RBV9 Cluster: Putative uncharacterized protein
DKFZp469B0933; n=7; Theria|Rep: Putative uncharacterized
protein DKFZp469B0933 - Pongo pygmaeus (Orangutan)
Length = 300
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 297 HVAQVYAIRQAISKALIAFYQKYVD--EASKKEIKDILVQYDRSLLVADPRRCEPKKF 464
H++QV++ ++ + LIAFY+ + E + +E + LV D+ L V E KKF
Sbjct: 73 HISQVWSFQKKQTDLLIAFYKHRITKLETAMQETQQALVSQDKELSVLRKENGELKKF 130
>UniRef50_Q0LQE8 Cluster: Putative uncharacterized protein; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
uncharacterized protein - Herpetosiphon aurantiacus ATCC
23779
Length = 113
Score = 33.5 bits (73), Expect = 7.3
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 155 HDHACNTQLRWRFSYVRIL-GRPGWAHVLHRKIGNTPP 45
H++ N QLRW Y R G+PG HV+ I T P
Sbjct: 34 HEYKLNDQLRWNHRYRRANDGKPGMTHVVVSAIAETCP 71
>UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular
organisms|Rep: 30S ribosomal protein S9 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 137
Score = 33.5 bits (73), Expect = 7.3
Identities = 32/93 (34%), Positives = 42/93 (45%)
Frame = +3
Query: 228 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILV 407
P+ LG E + DI V GGG Q AIR I++AL +D ++K +K
Sbjct: 58 PLETLGLE--NSYDIYVNATGGGLTGQADAIRLGIARALC-----QLDIENRKPLK---- 106
Query: 408 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
L DPR E +K+G AR Q S R
Sbjct: 107 --TEGYLTRDPRAKERRKYGLRKARKAPQYSKR 137
>UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20;
Bacteria|Rep: 30S ribosomal protein S9 - Rhodopirellula
baltica
Length = 137
Score = 33.5 bits (73), Expect = 7.3
Identities = 28/81 (34%), Positives = 38/81 (46%)
Frame = +3
Query: 264 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 443
VD+ + V GGG Q A+R +++AL + DEA ++ + S L D R
Sbjct: 68 VDLLIRVSGGGMTGQAGAVRMGLARALCSH-----DEALHDPMR------EGSFLTRDSR 116
Query: 444 RCEPKKFGGPGARARYQKSYR 506
E KK G GAR Q S R
Sbjct: 117 MKERKKPGLRGARRGVQFSKR 137
>UniRef50_A0DAX2 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_43,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 700
Score = 33.1 bits (72), Expect = 9.6
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = +3
Query: 261 MVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADP 440
+VD+ V ++GG AQ I A+S+A++ + + KK + +L L D
Sbjct: 630 LVDVNVVIRGGSQSAQSQCICSALSRAIVK-----MCPSIKKIFRKLL------LTRTDS 678
Query: 441 RRCEPKKFGGPGARARYQKSYR 506
R+ E KK G AR +Y S R
Sbjct: 679 RQVERKKLGLYKARKKYPYSRR 700
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,775,584
Number of Sequences: 1657284
Number of extensions: 13936051
Number of successful extensions: 34613
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 33593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34593
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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