Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_I06
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0152 - 1168928-1169377                                          158   6e-39
11_01_0155 - 1287003-1287452                                          158   6e-39
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539...    32   0.70 
01_05_0500 + 22752190-22752329,22752957-22753032,22753292-227533...    29   4.9  
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120...    28   8.6  

>12_01_0152 - 1168928-1169377
          Length = 149

 Score =  158 bits (383), Expect = 6e-39
 Identities = 70/105 (66%), Positives = 87/105 (82%)
 Frame = +3

Query: 192 LSPDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 371
           + P+       EPILL G+ +F  +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVD
Sbjct: 45  IRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVD 104

Query: 372 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
           EASKKE+KDI  +YDR+LLVADPRRCEPKKFGG GARAR+QKSYR
Sbjct: 105 EASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149



 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = +2

Query: 77  REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK 217
           R P   VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLK 53


>11_01_0155 - 1287003-1287452
          Length = 149

 Score =  158 bits (383), Expect = 6e-39
 Identities = 70/105 (66%), Positives = 87/105 (82%)
 Frame = +3

Query: 192 LSPDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 371
           + P+       EPILL G+ +F  +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVD
Sbjct: 45  IRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVD 104

Query: 372 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 506
           EASKKE+KDI  +YDR+LLVADPRRCEPKKFGG GARAR+QKSYR
Sbjct: 105 EASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149



 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = +2

Query: 77  REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK 217
           R P   VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLK 53


>07_03_1553 -
           27653473-27653490,27653634-27653673,27653852-27653939,
           27654150-27654230,27654644-27655084,27655692-27656325
          Length = 433

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +3

Query: 267 DIRVTVKGGGHVAQVYAIRQAISKAL 344
           D+  TVKGGG   QV AIR  IS+AL
Sbjct: 347 DVTCTVKGGGVSGQVGAIRLGISRAL 372


>01_05_0500 +
           22752190-22752329,22752957-22753032,22753292-22753351,
           22754718-22754882,22756299-22756358
          Length = 166

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/58 (29%), Positives = 32/58 (55%)
 Frame = -3

Query: 181 WAPVYTQHSMTTLAIRNCGGGFLTSEYLDGLDGLTSCIEKSATHLPNLKEFPIVSRNG 8
           W  V T H +T +A R+C G F   ++LD    L+  +++ + +LP L+   +++  G
Sbjct: 18  WNYVVTAHKLTVVA-RSCVGNFTAPDHLD----LSLTVQQLSGNLPVLRLEYLLTHQG 70


>03_03_0001 +
           13611070-13611172,13611812-13611873,13612001-13612072,
           13612158-13612394,13612473-13612650,13612731-13612863,
           13613686-13613845,13613925-13614078,13614159-13614262,
           13614354-13614512,13615399-13615467,13615543-13615611,
           13615772-13615909,13616044-13616124,13616805-13616933,
           13617717-13617864,13618007-13618017,13618094-13618234,
           13618314-13618439,13619164-13619220,13619355-13619453,
           13619540-13619762,13620236-13620480,13621325-13621438
          Length = 1003

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = -3

Query: 202 SGLNQVQWAPVYTQHSMTTLAIRNCGGGFLTSEYLDGLDGLTSCIEKSATH 50
           S   Q QWA    +     +A+++C  G  +S +   L G  +   ++ATH
Sbjct: 600 SSYEQQQWAAKVAEFLKPGVAVKHCKEGTESSAFWFALGGKQNYTSRNATH 650


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,547,385
Number of Sequences: 37544
Number of extensions: 414849
Number of successful extensions: 1115
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)