Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_I06
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    24   2.1  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    24   2.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   2.1  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    24   2.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   4.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   8.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   8.6  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +2

Query: 35  LKIWE-VCCRFFYARREPIQAVQVFGRKKTATAVAY 139
           + +W+ VC  F YA       V   GRK+    V Y
Sbjct: 363 MNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNVVY 398


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +2

Query: 35  LKIWE-VCCRFFYARREPIQAVQVFGRKKTATAVAY 139
           + +W+ VC  F YA       V   GRK+    V Y
Sbjct: 332 MNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNVVY 367


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +2

Query: 35  LKIWE-VCCRFFYARREPIQAVQVFGRKKTATAVAY 139
           + +W+ VC  F YA       V   GRK+    V Y
Sbjct: 383 MNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNVVY 418


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +2

Query: 35  LKIWE-VCCRFFYARREPIQAVQVFGRKKTATAVAY 139
           + +W+ VC  F YA       V   GRK+    V Y
Sbjct: 332 MNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNVVY 367


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 302  YMTTTLDCHSDVNHREFFLAEQKD 231
            ++TTT+DC +   + E  + +QK+
Sbjct: 958  HITTTIDCSTQSEYYELEVKDQKN 981


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 118 FLTSEYLDGLDGLT 77
           F++S +L+GL+GLT
Sbjct: 391 FVSSPFLNGLEGLT 404


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 196 AQTAAVQTSVNLSFCSARKNS 258
           A TAAVQTSV ++  S   N+
Sbjct: 811 ALTAAVQTSVGVTEISLASNA 831


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 196 AQTAAVQTSVNLSFCSARKNS 258
           A TAAVQTSV ++  S   N+
Sbjct: 901 ALTAAVQTSVGVTEISLASNA 921


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,279
Number of Sequences: 438
Number of extensions: 4063
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)