Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_I02
(943 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.006
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.019
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.033
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.54
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.72
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.8
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.1 bits (82), Expect = 0.004
Identities = 27/81 (33%), Positives = 28/81 (34%)
Frame = -1
Query: 883 GXXGGXGGXAXXGRXXPGXXXGGPPXGGXXXGXXXXXGXGGGXXXGGXXXXXXGGXXGGP 704
G GG GG + PG G GG G GGG G GG GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP---GGFEGGPGGFGGG- 243
Query: 703 XPXGXAXXXGGXXGGXXPXGG 641
P G GG GG GG
Sbjct: 244 -PGGFGGGLGGFGGGPGGFGG 263
Score = 34.3 bits (75), Expect = 0.025
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Frame = -1
Query: 883 GXXGGXGGXAXXGRXXPGXXXGGPPXGGXXXGXXXXXGXGGGXXXG-GXXXXXXGGXXGG 707
G GG GG G G G GG G G GG G G GG GG
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Query: 706 PXPXG 692
P G
Sbjct: 265 PGGHG 269
Score = 26.2 bits (55), Expect = 6.7
Identities = 19/71 (26%), Positives = 19/71 (26%)
Frame = -2
Query: 807 GGGXXXGLXXGXGXGAXPXXGGXXPXXXGVXXGGRXPXGXXXXXGAXXGXPGXXGAXXSP 628
GGG G G GG G G P G G G PG G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 627 XXXGXXPXGXG 595
G G G
Sbjct: 254 FGGGPGGFGGG 264
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 465 RPXRGGGXGGXXAXXXSPXPGXAAXGRXAAAXGXXPPXGG 584
R GGG GG P PG G G GG
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGG 222
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.006
Identities = 28/87 (32%), Positives = 28/87 (32%), Gaps = 6/87 (6%)
Frame = +3
Query: 642 PPXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPPXPHXXXXPXXFPPXGG-- 815
PP G P PP A G PP PP PPP P PP G
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP--APPPAIPGRSAP-ALPPLGNAS 410
Query: 816 ----PPXXXPGXXRPXXAXPPXPPKXP 884
PP P P A P PP P
Sbjct: 411 RTSTPPVPTP-PSLPPSAPPSLPPSAP 436
Score = 34.7 bits (76), Expect = 0.019
Identities = 21/78 (26%), Positives = 21/78 (26%)
Frame = +3
Query: 651 GXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPPXPHXXXXPXXFPPXGGPPXXX 830
G P PP A P PP PP P P PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 831 PGXXRPXXAXPPXPPKXP 884
P A PP PP P
Sbjct: 457 PPLPAGMPAAPPLPPAAP 474
Score = 31.5 bits (68), Expect = 0.18
Identities = 39/163 (23%), Positives = 40/163 (24%), Gaps = 6/163 (3%)
Frame = +2
Query: 473 PRGGXGGXXGAXPXPXPRXRGARAXGXGXRPXXPXXRXXXXPXPXGXXPXXXGXXXAPXX 652
P G G + P P P R A G P P R P P P G P
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAA---GSIPLPPQGRSAPPPPPPRSAPST-GRQPPPLS 380
Query: 653 PGXPXXAPXXXXXPXGXRPPXXTPXXXGXXPPXXGXA------PXPXPXXXPXXXPPPGX 814
P PP P P G A P P P P PP
Sbjct: 381 SSRAVSNPPA--------PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP-SL 431
Query: 815 APXXXAXXXXAXXXXPPXPPXXPXQXAXXXXXXKXXPXPQGPP 943
P PP PP P P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 30.3 bits (65), Expect = 0.41
Identities = 24/91 (26%), Positives = 25/91 (27%)
Frame = +2
Query: 671 APXXXXXPXGXRPPXXTPXXXGXXPPXXGXAPXPXPXXXPXXXPPPGXAPXXXAXXXXAX 850
AP RPP P PP P P PP AP +
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPI-PPPSNGTVSSPPNSPPRPIAPVSMNPAINST 287
Query: 851 XXXPPXPPXXPXQXAXXXXXXKXXPXPQGPP 943
PP PP A K P P PP
Sbjct: 288 SK-PPLPPPSSRVSAAALAANKKRPPPPPPP 317
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/99 (22%), Positives = 22/99 (22%)
Frame = +2
Query: 509 PXPXPRXRGARAXGXGXRPXXPXXRXXXXPXPXGXXPXXXGXXXAPXXPGXPXXAPXXXX 688
P P P G A P P P P P AP
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Query: 689 XPXGXRPPXXTPXXXGXXPPXXGXAPXPXPXXXPXXXPP 805
P P PP AP P P P P
Sbjct: 449 LPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 660 PPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPPXP 773
PP P A P G P PP P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +2
Query: 653 PGXPXXAPXXXXXPXGXRPPXXTPXXXGXXPPXXGXAPXPXPXXXPXXXPPPGXAPXXXA 832
P P AP PP P PP P P PPP AP A
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPL--PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/81 (24%), Positives = 21/81 (25%), Gaps = 5/81 (6%)
Frame = +3
Query: 645 PXGXXPPXXPPXXXAXPXGXGPPXXP---PXXXXXXPPXXXPPPXPHXXXXPXXFPP--X 809
P PP PP PP P P P PP P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 810 GGPPXXXPGXXRPXXAXPPXP 872
PP P P + P
Sbjct: 475 APPPAPAPAPAAPVASIAELP 495
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.019
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = +3
Query: 660 PPXXPPXXXAXPXGXGP-PXXPPXXXXXXPPXXXPPPXPHXXXXPXXFPPXGGPPXXXPG 836
PP PP P P PP PP PPP P PP PP G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP---PPPPPPPAVSAG 788
Query: 837 XXRPXXAXPPXPPK 878
R P P+
Sbjct: 789 GSRYYAPAPQAEPE 802
Score = 33.5 bits (73), Expect = 0.044
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 744 PPXXXPPPXPHXXXXPXXFPPXGGPPXXXPGXXRPXXAXPPXPPKXP 884
P P P P P P GGPP P PP PP P
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.24
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Frame = +2
Query: 743 PPXXGXAPXPXPXXXPXXXPPP--GXAPXXXAXXXXAXXXXPPXPPXXPXQXAXXXXXXK 916
PP P P P P P P G P A PP PP P A
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY-- 792
Query: 917 XXPXPQGPP 943
P PQ P
Sbjct: 793 YAPAPQAEP 801
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 645 PXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPP 767
P P P G PP PP PP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 642 PPXGXXPPXXPPXXXAXPXGXGPPXXPP 725
P G PP PP A G GPP PP
Sbjct: 756 PIMGGPPPPPPPPGVA---GAGPPPPPP 780
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.9 bits (74), Expect = 0.033
Identities = 21/79 (26%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Frame = +3
Query: 642 PPXGXXPPXXPPXXXAXPXGXGPPXXP-PXXXXXXPPXXXPPPXPHXXXXPXXFPPXGGP 818
P PP P A P P P PP P P PP P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 819 PXXXPGXXRPXXAXPPXPP 875
P +P PP PP
Sbjct: 1175 SSGIPPVPKPAAGVPPVPP 1193
Score = 33.1 bits (72), Expect = 0.058
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Frame = +3
Query: 642 PPXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPPXPHXXXXPXXFP-PXGGP 818
PP P P A P G P P P PP P P P G P
Sbjct: 1063 PPPVPAPSSEIPSIPA-PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Query: 819 PXXXPGXXRPXXAXPPXPPKXP 884
P P P P P P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVP 1143
Score = 32.3 bits (70), Expect = 0.10
Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 5/82 (6%)
Frame = +3
Query: 645 PXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPP-PXPHXXXXPXXFPPXGGPP 821
P P P A P P PP P PP P P P P G PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPK---PSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 822 XXXPGXX----RPXXAXPPXPP 875
P +P PP PP
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPP 1212
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = +2
Query: 596 PXPXGXXPXXXGXXXAPXXPGXPXXAPXXXXXPXGXRPPXXTPXXXGXXPPXXGXAPXPX 775
P P P AP P AP G P PP P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 776 PXXXPXXXPPPGXAP 820
P PPP AP
Sbjct: 1203 PSVGVPPVPPPSTAP 1217
Score = 31.1 bits (67), Expect = 0.24
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = +3
Query: 645 PXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPP-PXPHXXXXPXXFPPXGGPP 821
P PP PP A P PP PP PP P P P P PP
Sbjct: 1184 PAAGVPPVPPPSE-APPVPKPSVGVPPVP----PPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 822 XXXPGXXRPXXAXP 863
P P + P
Sbjct: 1239 VPAPSSEAPSVSTP 1252
Score = 30.7 bits (66), Expect = 0.31
Identities = 27/118 (22%), Positives = 29/118 (24%), Gaps = 2/118 (1%)
Frame = +3
Query: 516 PXP-GXAAXGRXAAAXGXXPPXGGXXXXPXXXXXXXXXXXXXXPPXGXXPPXXPPXXXAX 692
P P G + + A P G P P P P A
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 693 PXGXGPPXXPPXXXXXXPPXXXPPPXPHXXXX-PXXFPPXGGPPXXXPGXXRPXXAXP 863
G P P PP PP P P PP PP P P P
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 30.7 bits (66), Expect = 0.31
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 1/91 (1%)
Frame = +2
Query: 596 PXPXGXXPXXXGXXXAPXXPGXPXXAPXXXXXPXGXRP-PXXTPXXXGXXPPXXGXAPXP 772
P P P AP P P A P G P P + P G P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVP-KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Query: 773 XPXXXPXXXPPPGXAPXXXAXXXXAXXXXPP 865
P PPP AP PP
Sbjct: 1183 KPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 29.9 bits (64), Expect = 0.54
Identities = 23/81 (28%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Frame = +3
Query: 645 PXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPPXPHXXXXPXXFP-PXGGPP 821
P PP P P P PP PPP P P P G PP
Sbjct: 1027 PSADAPPI--PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
Query: 822 XXXPG----XXRPXXAXPPXP 872
P +P A PP P
Sbjct: 1085 VPAPSGIPPVPKPSVAAPPVP 1105
Score = 29.5 bits (63), Expect = 0.72
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = +3
Query: 642 PPXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPPXPHXXXXPXXFPPXGGPP 821
P PP P A P PP P PP P P P G PP
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK---PAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 822 XXXPGXXRPXXAXPPXPPKXP 884
P P P P
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVP 1230
Score = 29.5 bits (63), Expect = 0.72
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Frame = +3
Query: 642 PPXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXP-PXXXPPPXPHXXXXPXXFPPXGGP 818
PP PP P PP PP P P PP P P PP P
Sbjct: 1169 PPVPAPSSGIPPVPK--PAAGVPPVPPPSEAPPVPKPSVGVPPVP----PPSTAPPVPTP 1222
Query: 819 PXXXPGXXRPXXAXPPXP 872
P P PP P
Sbjct: 1223 SAGLPPVPVPTAKAPPVP 1240
Score = 29.1 bits (62), Expect = 0.95
Identities = 20/76 (26%), Positives = 20/76 (26%)
Frame = +2
Query: 644 PXXPGXPXXAPXXXXXPXGXRPPXXTPXXXGXXPPXXGXAPXPXPXXXPXXXPPPGXAPX 823
P P AP P PP P P P P PPP AP
Sbjct: 1012 PPVPKLSSKAPPVPL-PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Query: 824 XXAXXXXAXXXXPPXP 871
A PP P
Sbjct: 1071 SEIPSIPAPSGAPPVP 1086
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/84 (23%), Positives = 20/84 (23%), Gaps = 4/84 (4%)
Frame = +3
Query: 645 PXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXP----PPXPHXXXXPXXFPPXG 812
P PP PP P PP P P P P P
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSK 1020
Query: 813 GPPXXXPGXXRPXXAXPPXPPKXP 884
PP P P P P P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVP 1044
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +3
Query: 663 PXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPPXPHXXXXPXXFPPXGGPPXXXPG 836
P P A P P PP PP P P P P P PG
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 708 PPXXPPXXXXXXPPXXXPPPXPHXXXXPXXFPPXGGPPXXXPGXXRPXXAXPPXP 872
PP P PPP P P PP P P P + P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 642 PPXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPPXP 773
PP P PP P PP PP PP PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPP----PPSAPPMPAG--PPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 642 PPXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPP 767
P P PP A P GPP PP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.72
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 6/80 (7%)
Frame = +2
Query: 662 PXXAPXXXXXPXGXRPPXXTPXXXGXXPPXXGXAPXPXP---XXXPXXXPPPG--XAPXX 826
P AP RPP P PP AP P P P PPP AP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP-PIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 827 XAXXXXA-XXXXPPXPPXXP 883
+ PP PP P
Sbjct: 183 SPPSAPSLPSAVPPMPPKVP 202
Score = 27.9 bits (59), Expect = 2.2
Identities = 22/88 (25%), Positives = 24/88 (27%), Gaps = 11/88 (12%)
Frame = +3
Query: 645 PXGXXPPXXPPXXXAXPXGXG--PPXXPPXXXXXXPPXXXPPPXPHXXXXPXXFPPXGG- 815
P PP P P P PP PP P + P F P G
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGH 227
Query: 816 --------PPXXXPGXXRPXXAXPPXPP 875
P G P + PP PP
Sbjct: 228 APNVTSESPKFPNRGPSIPSASVPPVPP 255
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/79 (25%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Frame = +3
Query: 642 PPXGXXPPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXP-PPXPHXXXXPXXFPPXGGP 818
PP PP + P PP PP P + P P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEI--P 224
Query: 819 PXXXPGXXRPXXAXPPXPP 875
P P P A PP PP
Sbjct: 225 PTYTPKQADPLPAPPPPPP 243
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 744 PPXXXPPPXPHXXXXPXXFPPXGGPP 821
PP PPP P P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 693 PXGXGPPXXPPXXXXXXPPXXXPPPXP 773
P G PP PP PP PPP P
Sbjct: 5 PPGNPPP--PPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 801 PPXGGPPXXXPGXXRPXXAXPPXPP 875
PP PP P P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,715,302
Number of Sequences: 5004
Number of extensions: 19248
Number of successful extensions: 163
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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