Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_I02
         (943 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.12 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.47 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.9 bits (64), Expect = 0.12
 Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 5/69 (7%)
 Frame = +3

Query: 693 PXGXGPPXXPPXXXXXXPPXXXPPP-----XPHXXXXPXXFPPXGGPPXXXPGXXRPXXA 857
           P G  PP  P       PP   PPP      P     P       G P       +P  A
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLP--NAQPPPA 584

Query: 858 XPPXPPKXP 884
            PP PP  P
Sbjct: 585 PPPPPPMGP 593



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 14/49 (28%), Positives = 15/49 (30%)
 Frame = +3

Query: 660 PPXXPPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPPXPHXXXXPXXFPP 806
           P   PP     P   GPP  P        P    PP P+        PP
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = +3

Query: 708 PPXXPPXXXXXXPPXXXPPPXPHXXXXPXXFPPXGGPPXXXP 833
           P   P       PP   PPP       P    P GGP    P
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRP 611


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.47
 Identities = 17/38 (44%), Positives = 17/38 (44%)
 Frame = -1

Query: 772 GXGGGXXXGGXXXXXXGGXXGGPXPXGXAXXXGGXXGG 659
           G GGG   GG      GG  GGP P G     GG  GG
Sbjct: 201 GAGGGGSGGGAPGGG-GGSSGGPGPGG-----GGGGGG 232


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 20/82 (24%), Positives = 21/82 (25%), Gaps = 1/82 (1%)
 Frame = +3

Query: 642 PPXGXXPPXX-PPXXXAXPXGXGPPXXPPXXXXXXPPXXXPPPXPHXXXXPXXFPPXGGP 818
           PP    PP    P     P   G    PP       P   P   P         PP    
Sbjct: 194 PPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQG 253

Query: 819 PXXXPGXXRPXXAXPPXPPKXP 884
               P   +P    PP P   P
Sbjct: 254 MQRPPMMGQPPPIRPPNPMGGP 275


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,783
Number of Sequences: 2352
Number of extensions: 7706
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)