Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_I01
(917 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 5e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 38 0.003
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.025
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.032
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.057
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.099
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 32 0.13
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.17
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 31 0.23
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 29 0.70
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.92
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.6
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 3.7
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 4.9
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 6.5
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 26 8.6
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.9 bits (89), Expect = 5e-04
Identities = 41/177 (23%), Positives = 44/177 (24%), Gaps = 13/177 (7%)
Frame = +2
Query: 425 KKXPPPXXXXVXXXGPXPVPRXKX-------PXPPXXXXGXRFSPPQXGEXGFPXNSGKX 583
K+ PPP G P+ P PP P G P
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP----- 363
Query: 584 PXKXXXPXXXKXPXTXXXXXGXXFPXXPPP--PGXXPQXXPPXXXGX----PPPPXLXXX 745
P P + P P PPP PG PP PP P
Sbjct: 364 PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSL 423
Query: 746 PXXPPXXTPPXXPPXFPXXXXXXXXXPXFPPXXXXVXXFXXXXXXXXPXPPXXXPPP 916
P P PP PP P P PP P PP PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAA---PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 38.7 bits (86), Expect = 0.001
Identities = 27/90 (30%), Positives = 28/90 (31%), Gaps = 6/90 (6%)
Frame = +1
Query: 664 PPP--PRXXXTXXPPXXRGS----PPPPXPLXXPXXPPPXNPPSXPPXFPXPXXXRXXLP 825
PPP P PP S PP P P P PP PPS PP P LP
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 826 XXSPXXXXGXXFXXXPXXXXPPXPXXXPPP 915
+P P P P P
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 32.3 bits (70), Expect = 0.099
Identities = 23/84 (27%), Positives = 23/84 (27%)
Frame = +1
Query: 664 PPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXNPPSXPPXFPXPXXXRXXLPXXSPXX 843
PP T PP PP P P PP PPS P P P P
Sbjct: 404 PPLGNASRTSTPPVPT---PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Query: 844 XXGXXFXXXPXXXXPPXPXXXPPP 915
P P P P P
Sbjct: 461 AGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/85 (25%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Frame = +1
Query: 664 PPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPP-XNPPSXPPXFPXPXXXRXXLPXXSPX 840
PP R + PPPP P PP N S P P R P
Sbjct: 294 PPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPL 353
Query: 841 XXXGXXFXXXPXXXXPPXPXXXPPP 915
G P P PPP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 29.1 bits (62), Expect = 0.92
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 4/91 (4%)
Frame = +2
Query: 656 PXXPP--PPGXXPQXXPPXXXGXPPP--PXLXXXPXXPPXXTPPXXPPXFPXXXXXXXXX 823
P PP P P+ P PPP P PP P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 824 PXFPPXXXXVXXFXXXXXXXXPXPPXXXPPP 916
P PP V P PP PPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPP---PPP 317
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +2
Query: 656 PXXPPPPGXXPQXXPPXXXGXP-PPPXLXXXPXXPPXXTPPXXPP 787
P PP P P PP G P PP P PP P P
Sbjct: 444 PAAPPLPPSAP-IAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +1
Query: 664 PPPPRXXXTXXPPXXRGS--PPPPXPLXXPXXPPPXNPPSXPP 786
PP P + PP S P P P+ P +PP+ PP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Frame = +1
Query: 724 PPXPLXXPXXPPPXNPPSX----PPXFPXPXXXRXXLPXXSP 837
PP P P PP PS PP P P P SP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSP 271
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +1
Query: 667 PPPRXXXTXXPPXXRGSPPP---PXPLXXPXXPPPXNPPSXPPXFPXP 801
PP T PP PPP P P P PPP P S P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 670 PPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXNP--PSXPPXFPXP 801
PP + PP PPP P+ P PPP P P+ PP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVP--PPPSAPPMPAGPPSAPPP 1733
Score = 35.1 bits (77), Expect = 0.014
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 656 PXXPPPPGXXPQXXPPXXXGXPPPPXLXXXPXXPPXXTPPXXP 784
P PP PP PPPP P PP PP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = +2
Query: 656 PXXPPPPGXXPQXXPPXXXGXPPPPXLXXXPXXPPXXTP-PXXPPXFPXXXXXXXXXPXF 832
P PP P PPPP + P PP P P PP P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP--PPSAPPMPAGPPSAPPPPLPASSAPSV 1743
Query: 833 P 835
P
Sbjct: 1744 P 1744
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 25/106 (23%), Positives = 26/106 (24%)
Frame = +2
Query: 470 PXPVPRXKXPXPPXXXXGXRFSPPQXGEXGFPXNSGKXPXKXXXPXXXKXPXTXXXXXGX 649
P P P P P P P SG P P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP-----SS 1176
Query: 650 XFPXXPPPPGXXPQXXPPXXXGXPPPPXLXXXPXXPPXXTPPXXPP 787
P P P P PP P P + P PP PP P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 31.1 bits (67), Expect = 0.23
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +1
Query: 655 SQXPPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXN---PPSXPPXFPXPXXXRXXLP 825
S+ PP P PP S PP P+ P P + PS PP P P +P
Sbjct: 1019 SKAPPVP-LPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIP 1077
Query: 826 XXS 834
S
Sbjct: 1078 APS 1080
Score = 31.1 bits (67), Expect = 0.23
Identities = 23/87 (26%), Positives = 25/87 (28%)
Frame = +1
Query: 655 SQXPPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXNPPSXPPXFPXPXXXRXXLPXXS 834
S PP P+ PP S PP P PP P S P P P +P S
Sbjct: 1137 SGAPPVPKPSVAA-PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Query: 835 PXXXXGXXFXXXPXXXXPPXPXXXPPP 915
P P P P
Sbjct: 1196 EAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 30.7 bits (66), Expect = 0.30
Identities = 21/79 (26%), Positives = 21/79 (26%), Gaps = 2/79 (2%)
Frame = +1
Query: 667 PPPRXXXTXXPPXXRGSPPPPXPLXX--PXXPPPXNPPSXPPXFPXPXXXRXXLPXXSPX 840
P P P G PP P P P PP PP P P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Query: 841 XXXGXXFXXXPXXXXPPXP 897
G P PP P
Sbjct: 1222 PSAGLPPVPVPTAKAPPVP 1240
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +1
Query: 655 SQXPPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXNPPSXPPXFPXP 801
S+ PP P+ PP S PP P PP P + P P P
Sbjct: 1195 SEAPPVPKPS-VGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 29.1 bits (62), Expect = 0.92
Identities = 26/94 (27%), Positives = 29/94 (30%), Gaps = 7/94 (7%)
Frame = +1
Query: 655 SQXPPPPRXXXTXXPPXXRGSPPPPXP-LXXPXXP------PPXNPPSXPPXFPXPXXXR 813
S+ P P P G PP P P + P P PP PS P P P
Sbjct: 1071 SEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAA 1130
Query: 814 XXLPXXSPXXXXGXXFXXXPXXXXPPXPXXXPPP 915
+P S G P PP P P
Sbjct: 1131 PPVPVPS-----GAPPVPKPSVAAPPVPAPSGAP 1159
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/87 (25%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Frame = +1
Query: 655 SQXPPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXNPPSXPPXFPXPXXXRXXLPXXS 834
++ PP P+ P + PP P+ P P P S PP P P
Sbjct: 1009 ARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPI-PTSTPP-VPKSSSGAPSAPPPV 1066
Query: 835 PXXXXGXXFXXXPXXXXP-PXPXXXPP 912
P P P P P PP
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +2
Query: 656 PXXPPPPGXXPQXXPPXXXGXPPPPXLXXXPXXPPXXTPPXXPP 787
P P P G P P P P + P P PP P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 27.9 bits (59), Expect = 2.1
Identities = 28/117 (23%), Positives = 30/117 (25%)
Frame = +2
Query: 437 PPXXXXVXXXGPXPVPRXKXPXPPXXXXGXRFSPPQXGEXGFPXNSGKXPXKXXXPXXXK 616
PP P P P P P P G P + P P +
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP---VPPPSE 1196
Query: 617 XPXTXXXXXGXXFPXXPPPPGXXPQXXPPXXXGXPPPPXLXXXPXXPPXXTPPXXPP 787
P G P PPP P P G PP P PP P P
Sbjct: 1197 APPVPKPSVGV--PPVPPPSTAPP--VPTPSAGLPPVP--VPTAKAPPVPAPSSEAP 1247
Score = 27.5 bits (58), Expect = 2.8
Identities = 28/118 (23%), Positives = 29/118 (24%), Gaps = 1/118 (0%)
Frame = +2
Query: 437 PPXXXXVXXXGPXPVPRXKXPXPPXXXXGXRFSPPQXGEXGFPXNSGKXPXKXXXPXXXK 616
PP P PVP P P +PP G P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVA----APPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 617 X-PXTXXXXXGXXFPXXPPPPGXXPQXXPPXXXGXPPPPXLXXXPXXPPXXTPPXXPP 787
P G P PPP P P PPP P PP P
Sbjct: 1177 GIPPVPKPAAGV--PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +1
Query: 664 PPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXN--PPSXPPXFPXP 801
P PP P G PP P P P P P PP P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +1
Query: 655 SQXPPPPRXXXTXXP-PXXRGSPPPPXPLXX--PXXPPPXNPPSXPPXFPXP 801
S PP P+ P P +PP P P P PP PP P P
Sbjct: 1176 SGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Score = 25.8 bits (54), Expect = 8.6
Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Frame = +1
Query: 673 PRXXXTXXPPXXR-GSPPPPXPLXXPXXPPPXNPPSXPPXFPXPXXXRXXLPXXSPXXXX 849
P PP + S PP PL PP P + PP P P +P S
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPP-VPIP-TSTPPVPKSSSGAPS 1061
Query: 850 GXXFXXXPXXXXP--PXPXXXPP 912
P P P P PP
Sbjct: 1062 APPPVPAPSSEIPSIPAPSGAPP 1084
Score = 25.8 bits (54), Expect = 8.6
Identities = 33/161 (20%), Positives = 34/161 (21%)
Frame = +2
Query: 434 PPPXXXXVXXXGPXPVPRXKXPXPPXXXXGXRFSPPQXGEXGFPXNSGKXPXKXXXPXXX 613
P P P PVP P P G P SG P
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSI--------PAPSGAPPVPAPSGIPPVPKPSVAAP 1102
Query: 614 KXPXTXXXXXGXXFPXXPPPPGXXPQXXPPXXXGXPPPPXLXXXPXXPPXXTPPXXPPXF 793
P P PP PP PP PP P PP
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP-- 1160
Query: 794 PXXXXXXXXXPXFPPXXXXVXXFXXXXXXXXPXPPXXXPPP 916
P P + P PP PP
Sbjct: 1161 --VPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 25.8 bits (54), Expect = 8.6
Identities = 22/84 (26%), Positives = 24/84 (28%)
Frame = +1
Query: 664 PPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXNPPSXPPXFPXPXXXRXXLPXXSPXX 843
PPP + P S PP P PP P P P P +P S
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAP-SGIPPVPKPSVAAPPVPKPSVAVPPVPAPS--- 1118
Query: 844 XXGXXFXXXPXXXXPPXPXXXPPP 915
G P PP P P
Sbjct: 1119 --GAPPVPKPSVAAPPVPVPSGAP 1140
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.3 bits (75), Expect = 0.025
Identities = 21/47 (44%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -1
Query: 800 GXGXXGGXEGGFXGGGXXGXXKGXGG-GGDPRXXGGXXVXXXRGGGG 663
G G G GGF GGG G G GG GG P GG G GG
Sbjct: 215 GEGHHHGGHGGF-GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
Score = 33.1 bits (72), Expect = 0.057
Identities = 25/76 (32%), Positives = 26/76 (34%), Gaps = 7/76 (9%)
Frame = -1
Query: 917 GGGGXXXGXGGXXXXGXXX-KXXPXXXXGEXXGRXXRXXXGXGXXGGXEGGFXGG----- 756
G GG G GG G + G G G G GG GGF GG
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Query: 755 -GXXGXXKGXGGGGDP 711
G G G GG G P
Sbjct: 256 GGPGGFGGGPGGHGGP 271
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -2
Query: 796 GEXGGGXRGGXXGGGXGXXXKGGGGGXTXGXXGXXLWXXXGGGG 665
G GG GG G G G GGG G G G G GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = -3
Query: 837 GGXXGXXXXXXXXXGKXGGXXGGVXXGGXXGXX*RXGGGGXPXXXGGXXCGXXPGG-GGX 661
GG G G GG G G G GGG G G PGG GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Query: 660 LG 655
LG
Sbjct: 251 LG 252
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/47 (40%), Positives = 19/47 (40%)
Frame = -2
Query: 796 GEXGGGXRGGXXGGGXGXXXKGGGGGXTXGXXGXXLWXXXGGGGXXG 656
G GGG GG GGG G G GG G G G GG G
Sbjct: 184 GHNGGGF-GG-FGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGG 228
Score = 26.2 bits (55), Expect = 6.5
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -3
Query: 795 GKXGGXXGGVXXGGXXGXX*RXGGGGXPXXXGGXXCGXXPGGGGXLG 655
G GG GG GG G GGG G G PGG G G
Sbjct: 228 GGPGGFEGG--PGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 25.8 bits (54), Expect = 8.6
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = -3
Query: 834 GXXGXXXXXXXXXGKXGGXXGGVXXGGXXGXX*RXGGGGXPXXXGGXXCGXXPG--GGGX 661
G G G GG GG GG G GGG G G PG GGG
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGG--PGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
Query: 660 LGKXXP 643
G P
Sbjct: 266 GGHGGP 271
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.9 bits (74), Expect = 0.032
Identities = 19/44 (43%), Positives = 19/44 (43%)
Frame = -1
Query: 800 GXGXXGGXEGGFXGGGXXGXXKGXGGGGDPRXXGGXXVXXXRGG 669
G G GG GG GGG G G GG G R G RGG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGS-SGGRGG 66
Score = 31.5 bits (68), Expect = 0.17
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = -2
Query: 799 GGEXG-GGXRGGXXGGGXGXXXKGGGGGXTXGXXGXXLWXXXGGGGXXGKXXXXXG 635
GG G G RGG GGG G GG GG G G GG G+ G
Sbjct: 16 GGRGGFNGGRGGF-GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -2
Query: 784 GGXRGGXXGGGXGXXXKGGG-GGXTXGXXGXXLWXXXGGGGXXG 656
GG RGG G G GGG GG G G G GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -2
Query: 835 GKXXXGXXXXXXGGEXGGGXRGGXXGGGXGXXXKGGGGGXTXGXXG 698
G+ G G GG RGG G G +GG G G G
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 26.2 bits (55), Expect = 6.5
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = -2
Query: 781 GXRGGXXG--GGXG--XXXKGGGGGXTXGXXGXXLWXXXGGGGXXG 656
G RGG G GG G +GG GG G G GG G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 25.8 bits (54), Expect = 8.6
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = -1
Query: 836 GEXXGRXXRXXXGXGXXGGXEGGFXGG-GXXGXXKGXGGGGDPRXXGG 696
G GR G GG GG GG G G +G G GG GG
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG-GRGGSSGGRGG 66
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.057
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 3/87 (3%)
Frame = +1
Query: 664 PPPPRXXXTXXPPXX---RGSPPPPXPLXXPXXPPPXNPPSXPPXFPXPXXXRXXLPXXS 834
P PP PP R S PPP P P P P P P P P + P S
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAP--PIPSKAPPIPSSLPPP--AQPAAPVKS 183
Query: 835 PXXXXGXXFXXXPXXXXPPXPXXXPPP 915
P PP P PPP
Sbjct: 184 PPSAPSL------PSAVPPMPPKVPPP 204
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +2
Query: 656 PXXPPPPGXXPQXXPPXXXGXPPPPXLXXXPXXP--PXXTPPXXP 784
P P P P PP PP P P P P +PP P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 25.8 bits (54), Expect = 8.6
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 7/68 (10%)
Frame = +1
Query: 655 SQXPPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPP-------XNPPSXPPXFPXPXXXR 813
S PPP + P S P P P PPP N S P F P
Sbjct: 169 SSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHA 228
Query: 814 XXLPXXSP 837
+ SP
Sbjct: 229 PNVTSESP 236
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.099
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 712 GSPPPPXPLXXPXXPPPXNPPSXPPXFPXP 801
G+PPPP P PP PPS PP P P
Sbjct: 7 GNPPPPPP------PPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 656 PXXPPPPGXXPQXXPPXXXGXPPPP 730
P PPPP P PP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 697 PPXXRGSPPPPXPLXXPXXPPPXNPP 774
PP PPPP P PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = -2
Query: 850 PXXXXGKXXXGXXXXXXGGEXGGGXRGGXXG--GGXGXXXKGGGGGXTXGXXGXXLWXXX 677
P K G G GG RGG G GG G +GG GG + G G
Sbjct: 119 PKTVGPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGS 178
Query: 676 GGGGXXGKXXXXXG 635
GG G G
Sbjct: 179 RGGFRGGSRGGFRG 192
Score = 31.5 bits (68), Expect = 0.17
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 5/66 (7%)
Frame = -1
Query: 851 PXXXXGEXXGRXXRXXXGX--GXXGGXEGGFXG---GGXXGXXKGXGGGGDPRXXGGXXV 687
P G G R G G GG GGF G GG G +G GGG G
Sbjct: 124 PKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFR 183
Query: 686 XXXRGG 669
RGG
Sbjct: 184 GGSRGG 189
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 6/53 (11%)
Frame = +1
Query: 655 SQXPPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPP------XNPPSXPPXFP 795
S PPPP P PPP + P PPP PP PP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +1
Query: 664 PPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXNPPSXPPXFPXP 801
PPPP P PPP P+ PPP PP P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMG-GPPPPPPPPGVAGAGPPP 777
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 667 PPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXNPPS 777
PPP PP PPPP PPP PP+
Sbjct: 752 PPPAPIMGGPPPP----PPPPGVAGAGPPPPPPPPPA 784
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 664 PPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXNP 771
PPPP+ T PP G+ P P+ P P P P
Sbjct: 926 PPPPKVGETYHPPTASGTRVP--PVQQPSHPNPYTP 959
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = +1
Query: 664 PPPPRXXXTXXPPXXRGSPPPPXPLXXPXXPPPXN----PPSXPPXFPXP 801
PPPP T P SPPPP + PP + PP P P P
Sbjct: 909 PPPPTASMTASAPAI-ASPPPP-KVGETYHPPTASGTRVPPVQQPSHPNP 956
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 700 PXXRGS-PPPPXPLXXPXXPPPXNPPSXPPXFPXP 801
P +GS PPPP P+ P P N P+ P P P
Sbjct: 349 PQVQGSRPPPPPPMPAPIYNVP-NVPTVPTVSPNP 382
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.1 bits (62), Expect = 0.92
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -1
Query: 800 GXGXXGGXEGGFXGGGXXGXXKGXGGGGDPRXXGG 696
G G GG GGF G G G +G GGG R GG
Sbjct: 446 GGGSRGG-RGGFGGRGGFG-GRGGFGGGRGRGRGG 478
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/85 (21%), Positives = 20/85 (23%)
Frame = +2
Query: 584 PXKXXXPXXXKXPXTXXXXXGXXFPXXPPPPGXXPQXXPPXXXGXPPPPXLXXXPXXPPX 763
P + P + P P P P P P PP P P
Sbjct: 620 PQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSV 679
Query: 764 XTPPXXPPXFPXXXXXXXXXPXFPP 838
PP P P PP
Sbjct: 680 PQPPAVPVVPEAGQLNEPVVPPLPP 704
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 709 RGSPPPPXPLXXPXXPPPXNPP--SXPPXFP 795
+ +PPPP P+ P PP P + PP P
Sbjct: 1879 QAAPPPPPPMALPKAGPPSAAPTSALPPAGP 1909
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 697 PPXXRGSPPPPXPLXXPXXPPPXNPPSXPP 786
P SPPPP P P + PS PP
Sbjct: 412 PARPTESPPPPPISSSSTTPRPDDKPSLPP 441
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 697 PPXXRGSPPPPXPLXXPXXPPPXNPPSXPP 786
PP R P P P PP + P PP
Sbjct: 51 PPPTRRLPRKPLPFRSTSLQPPSSQPPAPP 80
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 799 GGEXGGGXRGGXXGGGXGXXXKGGGGGXTXGXXG 698
GG GG GG G G G GG T G G
Sbjct: 225 GGGLGGAGLGGLGGAGLGGF--GGANNATAGIAG 256
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 796 GEXGGGXRGGXXGGGXGXXXKGGGGG 719
GE G + G GGG G GGG G
Sbjct: 72 GEEGLNGQPGGPGGGPGEGFPGGGFG 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.148 0.538
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,770,911
Number of Sequences: 5004
Number of extensions: 24729
Number of successful extensions: 391
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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