Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_H24
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41745-1|AAC50462.1|  181|Homo sapiens PDGF associated protein p...    61   6e-09
BC007873-1|AAH07873.1|  181|Homo sapiens PDGFA associated protei...    61   6e-09
BC000684-1|AAH00684.1|  181|Homo sapiens PDGFA associated protei...    61   6e-09
AC004922-1|AAF03506.1|  181|Homo sapiens unknown protein.              61   6e-09
U65960-1|AAB07135.1|  171|Homo sapiens HASPP28 protein.                54   7e-07

>U41745-1|AAC50462.1|  181|Homo sapiens PDGF associated protein
           protein.
          Length = 181

 Score = 60.9 bits (141), Expect = 6e-09
 Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
 Frame = +2

Query: 167 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 343
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 344 XXXXXXX--HPTKAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXX 517
                    +  K KGV GLI++ENPNRV             G  E   LS         
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEK 117

Query: 518 XXXXXXYQKLHAEGKTEQ 571
                 Y K+H  GKTEQ
Sbjct: 118 QKAKERYMKMHLAGKTEQ 135


>BC007873-1|AAH07873.1|  181|Homo sapiens PDGFA associated protein 1
           protein.
          Length = 181

 Score = 60.9 bits (141), Expect = 6e-09
 Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
 Frame = +2

Query: 167 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 343
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 344 XXXXXXX--HPTKAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXX 517
                    +  K KGV GLI++ENPNRV             G  E   LS         
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEK 117

Query: 518 XXXXXXYQKLHAEGKTEQ 571
                 Y K+H  GKTEQ
Sbjct: 118 QKAKERYMKMHLAGKTEQ 135


>BC000684-1|AAH00684.1|  181|Homo sapiens PDGFA associated protein 1
           protein.
          Length = 181

 Score = 60.9 bits (141), Expect = 6e-09
 Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
 Frame = +2

Query: 167 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 343
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 344 XXXXXXX--HPTKAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXX 517
                    +  K KGV GLI++ENPNRV             G  E   LS         
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEK 117

Query: 518 XXXXXXYQKLHAEGKTEQ 571
                 Y K+H  GKTEQ
Sbjct: 118 QKAKERYMKMHLAGKTEQ 135


>AC004922-1|AAF03506.1|  181|Homo sapiens unknown protein.
          Length = 181

 Score = 60.9 bits (141), Expect = 6e-09
 Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
 Frame = +2

Query: 167 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 343
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 344 XXXXXXX--HPTKAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXX 517
                    +  K KGV GLI++ENPNRV             G  E   LS         
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEK 117

Query: 518 XXXXXXYQKLHAEGKTEQ 571
                 Y K+H  GKTEQ
Sbjct: 118 QKAKERYMKMHLAGKTEQ 135


>U65960-1|AAB07135.1|  171|Homo sapiens HASPP28 protein.
          Length = 171

 Score = 54.0 bits (124), Expect = 7e-07
 Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
 Frame = +2

Query: 176 GKFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXXXXXX 355
           G+   HKG  R++TSPEE++ Q + ++QK +  +EQ                        
Sbjct: 6   GRKGGHKGWARQYTSPEEIDTQLQSEKQKAREEEEQKEGGDGAAGDPKKEKKSLDSDESE 65

Query: 356 XXX--HPTKAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXX 529
                +  K KGV G I++ENPNRV             G  E   LS             
Sbjct: 66  DEDDDYQQKRKGVEGFIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEKQKAK 122

Query: 530 XXYQKLHAEGKTEQ 571
             Y ++H  GKTEQ
Sbjct: 123 ERYMRMHLAGKTEQ 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,976,645
Number of Sequences: 237096
Number of extensions: 754072
Number of successful extensions: 2106
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2096
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)