Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_H24
         (893 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060986-1|AAL28534.1|  215|Drosophila melanogaster GM14292p pro...    52   1e-06
AE014298-642|AAF45957.1|  215|Drosophila melanogaster CG11444-PA...    52   1e-06
BT024370-1|ABC86432.1|  189|Drosophila melanogaster IP07252p pro...    46   9e-05
AE014134-1632|AAF52770.1|  189|Drosophila melanogaster CG4438-PA...    46   9e-05

>AY060986-1|AAL28534.1|  215|Drosophila melanogaster GM14292p
           protein.
          Length = 215

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = +2

Query: 167 MPRGKFTNHKGRNRKFTSPEELEEQRKHDEQK 262
           MPRGKF NHKGR+R FTSPEEL+++ + D  +
Sbjct: 1   MPRGKFVNHKGRSRHFTSPEELQQESEEDSDQ 32



 Score = 38.3 bits (85), Expect = 0.014
 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
 Frame = +2

Query: 380 KGVSGLIEVENPNRV-------VXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXY 538
           KGV+ LIE+ENPNRV       +            G   KP+LS               Y
Sbjct: 106 KGVASLIEIENPNRVTKKATQKLSAIKLDDGPAGAGGNPKPELSRREREQIEKQRARQRY 165

Query: 539 QKLHAEGKTEQ 571
           +KLHA GKT +
Sbjct: 166 EKLHAAGKTTE 176


>AE014298-642|AAF45957.1|  215|Drosophila melanogaster CG11444-PA
           protein.
          Length = 215

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = +2

Query: 167 MPRGKFTNHKGRNRKFTSPEELEEQRKHDEQK 262
           MPRGKF NHKGR+R FTSPEEL+++ + D  +
Sbjct: 1   MPRGKFVNHKGRSRHFTSPEELQQESEEDSDQ 32



 Score = 38.3 bits (85), Expect = 0.014
 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
 Frame = +2

Query: 380 KGVSGLIEVENPNRV-------VXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXY 538
           KGV+ LIE+ENPNRV       +            G   KP+LS               Y
Sbjct: 106 KGVASLIEIENPNRVTKKATQKLSAIKLDDGPAGAGGNPKPELSRREREQIEKQRARQRY 165

Query: 539 QKLHAEGKTEQ 571
           +KLHA GKT +
Sbjct: 166 EKLHAAGKTTE 176


>BT024370-1|ABC86432.1|  189|Drosophila melanogaster IP07252p
           protein.
          Length = 189

 Score = 45.6 bits (103), Expect = 9e-05
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +2

Query: 167 MPRGKFTNHKGRNRKFTSPEELEEQRKHD 253
           MPRGKF ++KGR R+FTSPEEL ++ + D
Sbjct: 1   MPRGKFLSYKGRTRQFTSPEELRQESEDD 29



 Score = 29.9 bits (64), Expect = 4.9
 Identities = 22/64 (34%), Positives = 27/64 (42%)
 Frame = +2

Query: 380 KGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXYQKLHAEG 559
           KGV+ LIE++NPNRV              D  K  LS               Y+KLH  G
Sbjct: 92  KGVASLIEIDNPNRVSKKGPQKISAIML-DQTKAGLS----RRDQDQSARKRYEKLHVAG 146

Query: 560 KTEQ 571
           KT +
Sbjct: 147 KTTE 150


>AE014134-1632|AAF52770.1|  189|Drosophila melanogaster CG4438-PA
           protein.
          Length = 189

 Score = 45.6 bits (103), Expect = 9e-05
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +2

Query: 167 MPRGKFTNHKGRNRKFTSPEELEEQRKHD 253
           MPRGKF ++KGR R+FTSPEEL ++ + D
Sbjct: 1   MPRGKFLSYKGRTRQFTSPEELRQESEDD 29



 Score = 29.9 bits (64), Expect = 4.9
 Identities = 22/64 (34%), Positives = 27/64 (42%)
 Frame = +2

Query: 380 KGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXYQKLHAEG 559
           KGV+ LIE++NPNRV              D  K  LS               Y+KLH  G
Sbjct: 92  KGVASLIEIDNPNRVSKKGPQKISAIML-DQTKAGLS----RRDQDQSARKRYEKLHVAG 146

Query: 560 KTEQ 571
           KT +
Sbjct: 147 KTTE 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,823,904
Number of Sequences: 53049
Number of extensions: 234606
Number of successful extensions: 815
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)