Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_H23
         (926 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9Y296 Cluster: Trafficking protein particle complex su...   159   9e-38
UniRef50_A7RYC9 Cluster: Predicted protein; n=1; Nematostella ve...   155   2e-36
UniRef50_Q5DF44 Cluster: SJCHGC05124 protein; n=2; Schistosoma j...   120   5e-26
UniRef50_Q20100 Cluster: Putative uncharacterized protein; n=2; ...   107   3e-22
UniRef50_Q332J4 Cluster: Putative NAD-dependent DNA ligase; n=1;...    34   4.5  
UniRef50_Q4XM37 Cluster: Putative uncharacterized protein; n=2; ...    34   4.5  
UniRef50_Q4SLD5 Cluster: Chromosome 7 SCAF14557, whole genome sh...    34   5.9  
UniRef50_Q8EU23 Cluster: Multidrug resistance protein; n=2; Baci...    34   5.9  
UniRef50_A1SW08 Cluster: Putative uncharacterized protein; n=1; ...    34   5.9  
UniRef50_Q4Z2K0 Cluster: Putative uncharacterized protein; n=1; ...    34   5.9  
UniRef50_A5DRG3 Cluster: Putative uncharacterized protein; n=1; ...    34   5.9  

>UniRef50_Q9Y296 Cluster: Trafficking protein particle complex
           subunit 4; n=34; Coelomata|Rep: Trafficking protein
           particle complex subunit 4 - Homo sapiens (Human)
          Length = 219

 Score =  159 bits (386), Expect = 9e-38
 Identities = 70/129 (54%), Positives = 97/129 (75%)
 Frame = +3

Query: 375 MVIYGIYIVSKSGGLIYNYDHNIPRVETEKTFGFPLDIKLQYENKKVVVAFGQRDGINVG 554
           M I+ +Y+V+K+GGLIY  D   PR E EKTF +PLD+ L+  +++V+VAFGQRDGI VG
Sbjct: 1   MAIFSVYVVNKAGGLIYQLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVG 60

Query: 555 HVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFGRVRATTNEKIVLASMFYPLFA 734
           H +L++NG  V GR T D ++V + +    NYP+S++FGR R T+NEK++LASMF+ LFA
Sbjct: 61  HAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLFA 120

Query: 735 LASQLSPYQ 761
           + SQLSP Q
Sbjct: 121 IGSQLSPEQ 129


>UniRef50_A7RYC9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 222

 Score =  155 bits (375), Expect = 2e-36
 Identities = 74/150 (49%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
 Frame = +3

Query: 375 MVIYGIYIVSKSGGLIYNYDHNIPRVETEKTFGFPLDIKLQYENKKVVVAFGQRDGINVG 554
           M I+ +YI++++GGLIY++DH  P+ E EKT+ +PL+I L+ ++K  V+ FG RD + VG
Sbjct: 1   MAIFSVYILNRAGGLIYHFDHYTPKSEVEKTYSYPLEITLRGDDKLEVI-FGARDNVKVG 59

Query: 555 HVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFGRVRATTNEKIVLASMFYPLFA 734
           H LL++NG  V GR   D  DV + +  KENYP+SLKFGR +  TNE+I+LASMF+PLFA
Sbjct: 60  HSLLAINGENVVGRKLPDGTDVMEFLANKENYPISLKFGRAKLKTNERIMLASMFHPLFA 119

Query: 735 LASQLSPYQNLRN-RILTADHSVVVFNLRC 821
           +A++LSP Q      +L AD     F L C
Sbjct: 120 IAAKLSPEQRSSGIEVLEADS----FKLHC 145


>UniRef50_Q5DF44 Cluster: SJCHGC05124 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC05124 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 236

 Score =  120 bits (289), Expect = 5e-26
 Identities = 53/127 (41%), Positives = 82/127 (64%)
 Frame = +3

Query: 375 MVIYGIYIVSKSGGLIYNYDHNIPRVETEKTFGFPLDIKLQYENKKVVVAFGQRDGINVG 554
           M +YG+Y++S+SG L + YDH+   VE EK + +PL    +  + +++V FG  D + +G
Sbjct: 1   MSVYGLYVISESGSLQFYYDHSDVNVEVEKKYEYPLPFHFKVVDGRLIVDFGACDDVKIG 60

Query: 555 HVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFGRVRATTNEKIVLASMFYPLFA 734
           + ++SV+G    G   EDNRD+  +   K N+PL++KFGR R   N++I LASMF PL +
Sbjct: 61  YTVISVDGVMAKGTFLEDNRDIMKVFSDKSNFPLTIKFGRPRLRPNDRIHLASMFQPLHS 120

Query: 735 LASQLSP 755
           +A  LSP
Sbjct: 121 MARLLSP 127


>UniRef50_Q20100 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 224

 Score =  107 bits (258), Expect = 3e-22
 Identities = 49/130 (37%), Positives = 87/130 (66%), Gaps = 3/130 (2%)
 Frame = +3

Query: 381 IYGIYIVSKSGGLIYNYDHNIPRVETEKTFGFPLDIKLQYENKKVVVAFGQRDGINVGHV 560
           I  ++I++++G LIY+++      E EKT+ +P+D+ L+  ++K VV FG++DGI + + 
Sbjct: 5   IQHLFIINRAGSLIYSWEARTETPEVEKTYEWPIDVHLEEVDQKAVVVFGEKDGIKLRYY 64

Query: 561 LLSVNGSPVTGRTTE---DNRDVFDIIEAKENYPLSLKFGRVRATTNEKIVLASMFYPLF 731
           + SVNG  V+G   +      +V + ++ +++YP+++KF     +TNEKI+L+SMF+ LF
Sbjct: 65  VKSVNGETVSGTRLQLGAQQVNVLEYLQEEDHYPVTVKFAAPTVSTNEKIILSSMFHSLF 124

Query: 732 ALASQLSPYQ 761
            +A QLSP Q
Sbjct: 125 TIAVQLSPCQ 134


>UniRef50_Q332J4 Cluster: Putative NAD-dependent DNA ligase; n=1;
           Clostridium phage c-st|Rep: Putative NAD-dependent DNA
           ligase - Clostridium botulinum C bacteriophage
          Length = 649

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
 Frame = +3

Query: 435 HNIPRVETEKTFGFPLDIKLQYENKKVVVAFGQRDGINVGHVLLSVNGSPVTGRTTEDN- 611
           HNIP    EKT    ++   ++   K ++   + DG+     L+  NG  + G T  +  
Sbjct: 74  HNIPLKSLEKTKS--INNLEKFIRGKTIIIMDKGDGLTCE--LIYENGELIQGSTRGNGT 129

Query: 612 --RDVFDIIEAKENYPLSLKFGRVRATTNEKIVLASMFYPLFALASQLSPYQNLRNRI 779
              D+   ++  +N PL + F      + E ++L   F  + +   +   Y N RN +
Sbjct: 130 IGEDITHNVKTFKNIPLQIDFKGYLKLSGESVILDRDFELINSKLDEADKYSNSRNLV 187


>UniRef50_Q4XM37 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 315

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -1

Query: 482 KGKSKRFLSLDSRNIVI-IVVDETTRLANNINSVYNHFIIFFN-CSVFYTYALNVKCNCE 309
           K K+ R+++  ++ I+  I++   T  +N  N +YN FI  FN     Y  ++N +  C 
Sbjct: 38  KSKNDRYITYKNKCIIYEILISTNTYYSNRTNQIYNIFIYLFNYIDDIYLKSMNEEIVCY 97

Query: 308 IYET 297
             ET
Sbjct: 98  PMET 101


>UniRef50_Q4SLD5 Cluster: Chromosome 7 SCAF14557, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 7
           SCAF14557, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 370

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 492 LQYENKKVVVAFGQRDGINVGHVLLSVNGSPVTGRTTED 608
           L++  K      GQR G++VG V+L VNG  V G+  E+
Sbjct: 313 LEFYTKVTFGGPGQRAGLHVGDVVLKVNGQSVAGKYLEE 351


>UniRef50_Q8EU23 Cluster: Multidrug resistance protein; n=2;
           Bacillaceae|Rep: Multidrug resistance protein -
           Oceanobacillus iheyensis
          Length = 509

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = -2

Query: 715 MLASTIFSFVVALTLPNFRLRG*FSLAS--IISKTSLLSSVVLPVTGDPFTDSNTCPTFI 542
           ++  ++F+ ++ + +    LRG   LAS  ++   +L+S+ + P+TG  F      P  I
Sbjct: 280 VITMSMFAAMILVPIYLQNLRGFSPLASGLMLLPGALISAFMSPITGKLFDRIGARPLAI 339

Query: 541 PSLWPNATTTFLFS 500
             L   A TTFLFS
Sbjct: 340 TGLGITAITTFLFS 353


>UniRef50_A1SW08 Cluster: Putative uncharacterized protein; n=1;
           Psychromonas ingrahamii 37|Rep: Putative uncharacterized
           protein - Psychromonas ingrahamii (strain 37)
          Length = 498

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 22/69 (31%), Positives = 33/69 (47%)
 Frame = +3

Query: 561 LLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFGRVRATTNEKIVLASMFYPLFALA 740
           L SVNG P TG+TT     + D +  +      LK  +   +  +KI +A     + AL 
Sbjct: 373 LYSVNGPPGTGKTTMLRDIIADNMVKRAKVLAGLKLAKSAFSATKKINVAGEIVEVKALI 432

Query: 741 SQLSPYQNL 767
            +LS Y+ L
Sbjct: 433 PELSGYEML 441


>UniRef50_Q4Z2K0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 189

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = -2

Query: 241 NINSRTYLNFLSYIYSLFLIDMRSKYEY*RKSYFLIEVPQIVKLNSEKMQNKN 83
           NI +R   N  +Y + +  I+    Y Y     ++ ++  I+K+ ++K++NKN
Sbjct: 126 NIKNRKKKNIKNYEHDINKINQSDSYSYESDENYIDDINNILKIKTQKIENKN 178


>UniRef50_A5DRG3 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 178

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 375 MVIYGIYIVSKSGGLIYNYDHN 440
           M +Y IYI++KSGGLIY  D N
Sbjct: 1   MKVYSIYILNKSGGLIYQQDVN 22


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,948,242
Number of Sequences: 1657284
Number of extensions: 14533258
Number of successful extensions: 42389
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 40202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42355
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)