Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_H23
         (926 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.63 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   1.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    24   1.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    24   1.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    24   1.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +3

Query: 390  IYIVSKSGGLIYNYDHNIPRVETE---KTFGFPLDIKLQYENKKVVVAFGQRDGI 545
            + +  + GG++  +  N+P+ ETE   K+  F     L +   K++ +F +  G+
Sbjct: 1270 VVVNQQIGGIVTYFSTNLPKRETEVRKKSLDFGKLCSLHHHLSKLIKSFNEIYGV 1324


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +3

Query: 657 SLKFGRVRATTNEKIVLASMFYPLFALASQLSPYQNLRNRILTADHSVVVFNLRCNLIXX 836
           SL+   +  TT EK +L      +FAL  +   Y  +   I+  DH  + F  RC L+  
Sbjct: 634 SLRGPELNYTTTEKELLGV----IFAL-HKFRIYIQVTKIIIRTDHQALKFLSRCRLLSE 688

Query: 837 R 839
           R
Sbjct: 689 R 689


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 609 CLPLFFLSLEIHLLIVIHVQHLFHLFGQMPQQLFYF 502
           CL ++ LSL   L   I+  H +    Q+  ++F F
Sbjct: 265 CLTMYKLSLTEDLYFAIYEMHWYDASKQIQNEVFIF 300


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 74  VVYVFVLHFFTIQLNYLWNFD 136
           +V   VL F T+Q  ++W F+
Sbjct: 210 IVMALVLQFITLQHTFIWVFN 230


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 74  VVYVFVLHFFTIQLNYLWNFD 136
           +V   VL F T+Q  ++W F+
Sbjct: 210 IVMALVLQFITLQHTFIWVFN 230


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 74  VVYVFVLHFFTIQLNYLWNFD 136
           +V   VL F T+Q  ++W F+
Sbjct: 210 IVMALVLQFITLQHTFIWVFN 230


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 213 FYLTFIVYFLSICVANMNIKE 151
           FY  FIVYFL   V  M +++
Sbjct: 151 FYAQFIVYFLIYAVLEMLLQK 171


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 618 HLYCLPLFFLSLEIHLLIVIHVQHLFHLF 532
           + YC    F+   +HLL ++ + H F  F
Sbjct: 148 YFYCA---FIIFTVHLLFLLCIYHFFCAF 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,498
Number of Sequences: 336
Number of extensions: 4062
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25961683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)