Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_H23
(926 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 30 0.40
SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase Tpp1|Schi... 29 1.2
SPCC965.10 |||transcription factor |Schizosaccharomyces pombe|ch... 28 1.6
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 28 1.6
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 2.1
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 3.8
SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces po... 26 6.6
SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyc... 26 6.6
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 26 8.7
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 30.3 bits (65), Expect = 0.40
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = -2
Query: 646 FSLASIISKTSLLSSVVLPV-----TGDPFT-DSNTCPTFIPSLWPNATTT 512
F +S+IS SL SS VLP T P T S++ +F PS N TTT
Sbjct: 228 FLPSSVISSASLSSSSVLPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTT 278
>SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase
Tpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 543 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFGRV-RATTNEKIVLA-SM 716
+ +GH +++NG+ VT R DV II + N +S K + + N K++L
Sbjct: 291 LEIGHDWVNLNGNKVTVRAITVGIDVPRIIRSSGNVSVSEKLEELNKRYENMKVILGRDR 350
Query: 717 FYPLFALASQLSPYQ 761
L+ + +L +Q
Sbjct: 351 LDELYGVPQKLRSFQ 365
>SPCC965.10 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 352 LQLKKIIKWLYTEFILLASLVVSSTTMITIFLESRLRKRLDFPLIL 489
+ L+++I + + + L+ T +I + LES LR L FP+++
Sbjct: 412 MYLRQVISRMPPVSLEMQVLLHKQTQLIDLLLESSLRNSLSFPMLI 457
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 601 VVLPVTGDPFTDSNTCPTFIPSLWPNATTTFL 506
V+L DP +D+ + PTF+PS P+ TT +L
Sbjct: 13 VMLNQQQDP-SDAQSSPTFVPSANPSLTTPWL 43
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 543 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFGRVRATT 689
+NVG +LSV +PV + E+++DV D I A LS R ++T+
Sbjct: 560 LNVGPNMLSVGEAPVESTSKEEDKDVPDPI-ANAMAELSSSMRRRQSTS 607
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 27.1 bits (57), Expect = 3.8
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 265 YVKLLKLVCERVS*ISQLHLTFNAYV*KTLQLKKIIKWLYTEFILLASLVVSSTT 429
+ KLL L C RV + QL L Y+ +TL IK + + L+SL+ + T
Sbjct: 788 FQKLLCLCCNRVDCVRQLALECMNYIMETLPHLLGIKEILFSVLELSSLLWKART 842
>SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 674
Score = 26.2 bits (55), Expect = 6.6
Identities = 20/95 (21%), Positives = 42/95 (44%)
Frame = -2
Query: 352 VFSTHMH*MLNVIVKSTKLVHKLILVISRKLLENITRNINSRTYLNFLSYIYSLFLIDMR 173
+F+ M +LN I KST + L + + + + R + R NF + + S+ L++
Sbjct: 547 IFALKMEHLLNEIQKSTLSLKSLQIGTILQEVMTMAREHHVRIEANFANTVLSILLVEGA 606
Query: 172 SKYEY*RKSYFLIEVPQIVKLNSEKMQNKNINHPV 68
+ Y P + +S+ N ++ +P+
Sbjct: 607 GRQLYPEMDLLSNATPYLRSASSK--SNVSLTNPM 639
>SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 572
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 FLFCIFSLFSLTICGTSIKK 143
F+FC+F LFSL + G K+
Sbjct: 477 FIFCLFFLFSLVLFGYDPKR 496
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -1
Query: 386 VYNHFIIFFNCSVFYTYALNVKCNCEIYETRSQTNFSNFT 267
++ F+ + S+ YT LNV C ++ T +FT
Sbjct: 689 MFTSFVQYIFLSIMYTNVLNVYAFCNTHDVSWGTKGDHFT 728
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,371,021
Number of Sequences: 5004
Number of extensions: 67555
Number of successful extensions: 198
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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