Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_H23
         (926 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0156 - 5981080-5982189,5982227-5982247,5983308-5983337           31   1.7  
02_01_0410 + 2996779-2997888                                           31   1.7  
06_01_0367 - 2636487-2636498,2636655-2636724,2636831-2636937,263...    30   2.3  
07_03_0242 + 15700336-15700401,15700481-15700649,15701828-15702024     30   3.0  
12_02_0492 + 19668896-19669893,19670886-19670972,19671067-19671097     29   5.2  
06_03_1318 - 29282562-29282566,29282727-29282810,29282913-292833...    29   5.2  
02_01_0680 + 5054306-5056411,5057200-5057243,5057549-5057664,505...    29   5.2  
01_01_0012 + 71903-72935,73468-73981,74619-76008                       29   6.9  

>03_02_0156 - 5981080-5982189,5982227-5982247,5983308-5983337
          Length = 386

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 32  LKIWTTSTIITKNWVVYVFVLHFFTIQLNYLWNFD*KIALSLIFIFATHI 181
           LK W + + I    V+YVF  + FT+   Y W      ++S+ F++  H+
Sbjct: 173 LKTWLSLSTILGGSVIYVFTDNQFTVTA-YTWAVAYLASMSIDFVYIKHV 221


>02_01_0410 + 2996779-2997888
          Length = 369

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 32  LKIWTTSTIITKNWVVYVFVLHFFTIQLNYLWNFD*KIALSLIFIFATHI 181
           LK W + + I    V+YVF  + FT+   Y W      ++S+ F++  H+
Sbjct: 156 LKTWLSLSTILGGSVIYVFTDNQFTVTA-YTWAVAYLASMSIDFVYIKHV 204


>06_01_0367 -
           2636487-2636498,2636655-2636724,2636831-2636937,
           2637208-2637226,2637383-2637470,2638175-2638303,
           2638428-2638506,2639658-2639720,2640437-2640535,
           2641583-2641740,2642926-2643094,2643174-2643239
          Length = 352

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +3

Query: 678 RATTNEKIVLASMFYPLFALASQLSPYQNLRNRILTADHSVVVFNLRC 821
           R  TN+ + LAS+++ + A++ QLSP        L   H+   F+L C
Sbjct: 29  RTDTNDSLRLASLWHSMHAISQQLSPTHGCEGIDLLQAHN---FDLHC 73



 Score = 29.9 bits (64), Expect = 3.0
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +3

Query: 381 IYGIYIVSKSGGLIYNYDH 437
           IY ++I++KSGGLIY  D+
Sbjct: 6   IYSLFIINKSGGLIYYKDY 24


>07_03_0242 + 15700336-15700401,15700481-15700649,15701828-15702024
          Length = 143

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +3

Query: 381 IYGIYIVSKSGGLIYNYDH 437
           IY ++I++KSGGLIY  D+
Sbjct: 6   IYSLFIINKSGGLIYYKDY 24



 Score = 29.9 bits (64), Expect = 3.0
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +3

Query: 678 RATTNEKIVLASMFYPLFALASQLSPYQNLRNRILTADHSVVVFNLRC 821
           R  TN+ + LAS+++ + A++ QLSP        L   H+   F+L C
Sbjct: 29  RTDTNDSLRLASLWHSMHAISQQLSPTPGCEGIDLLQAHN---FDLHC 73


>12_02_0492 + 19668896-19669893,19670886-19670972,19671067-19671097
          Length = 371

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 608 VFRCSSCHWRSIY 570
           +FRCS+CHW  +Y
Sbjct: 248 LFRCSTCHWSRVY 260


>06_03_1318 -
           29282562-29282566,29282727-29282810,29282913-29283380,
           29283735-29283917,29284362-29284467,29284627-29284651,
           29284736-29284855,29284920-29284997,29285646-29285774,
           29285976-29285989,29286168-29287944,29288344-29288489,
           29288921-29291029
          Length = 1747

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 561 IHVQHLFHLFGQMPQQLFYFHTAI 490
           +H+++  HLF +MP   F F TA+
Sbjct: 51  LHLRYALHLFDRMPASTFLFDTAL 74


>02_01_0680 +
           5054306-5056411,5057200-5057243,5057549-5057664,
           5057942-5058036
          Length = 786

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 561 IHVQHLFHLFGQMPQQLFYFHTAI 490
           +H+++  HLF +MP   F F TA+
Sbjct: 51  LHLRYALHLFDRMPPSTFLFDTAL 74


>01_01_0012 + 71903-72935,73468-73981,74619-76008
          Length = 978

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = -2

Query: 592 PVTGDPF----TDSNTCPTFIPSLWPNATTTFLFSYCNLISRGNPNV 464
           PV G PF    + SNT  T + S +P        +Y N++++  PN+
Sbjct: 175 PVMGSPFPVFFSASNTAATVVTSTFPPTLPAVSSAYPNMVNQTMPNM 221


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,832,120
Number of Sequences: 37544
Number of extensions: 359301
Number of successful extensions: 856
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)