Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_H23
         (926 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010866-1|AAH10866.1|  219|Homo sapiens TRAPPC4 protein protein.     159   1e-38
AF151862-1|AAD34099.1|  219|Homo sapiens CGI-104 protein protein.     159   1e-38
AF105025-1|AAF21897.1|  219|Homo sapiens unknown protein.             159   1e-38

>BC010866-1|AAH10866.1|  219|Homo sapiens TRAPPC4 protein protein.
          Length = 219

 Score =  159 bits (386), Expect = 1e-38
 Identities = 70/129 (54%), Positives = 97/129 (75%)
 Frame = +3

Query: 375 MVIYGIYIVSKSGGLIYNYDHNIPRVETEKTFGFPLDIKLQYENKKVVVAFGQRDGINVG 554
           M I+ +Y+V+K+GGLIY  D   PR E EKTF +PLD+ L+  +++V+VAFGQRDGI VG
Sbjct: 1   MAIFSVYVVNKAGGLIYQLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVG 60

Query: 555 HVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFGRVRATTNEKIVLASMFYPLFA 734
           H +L++NG  V GR T D ++V + +    NYP+S++FGR R T+NEK++LASMF+ LFA
Sbjct: 61  HAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLFA 120

Query: 735 LASQLSPYQ 761
           + SQLSP Q
Sbjct: 121 IGSQLSPEQ 129


>AF151862-1|AAD34099.1|  219|Homo sapiens CGI-104 protein protein.
          Length = 219

 Score =  159 bits (386), Expect = 1e-38
 Identities = 70/129 (54%), Positives = 97/129 (75%)
 Frame = +3

Query: 375 MVIYGIYIVSKSGGLIYNYDHNIPRVETEKTFGFPLDIKLQYENKKVVVAFGQRDGINVG 554
           M I+ +Y+V+K+GGLIY  D   PR E EKTF +PLD+ L+  +++V+VAFGQRDGI VG
Sbjct: 1   MAIFSVYVVNKAGGLIYQLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVG 60

Query: 555 HVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFGRVRATTNEKIVLASMFYPLFA 734
           H +L++NG  V GR T D ++V + +    NYP+S++FGR R T+NEK++LASMF+ LFA
Sbjct: 61  HAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLFA 120

Query: 735 LASQLSPYQ 761
           + SQLSP Q
Sbjct: 121 IGSQLSPEQ 129


>AF105025-1|AAF21897.1|  219|Homo sapiens unknown protein.
          Length = 219

 Score =  159 bits (386), Expect = 1e-38
 Identities = 70/129 (54%), Positives = 97/129 (75%)
 Frame = +3

Query: 375 MVIYGIYIVSKSGGLIYNYDHNIPRVETEKTFGFPLDIKLQYENKKVVVAFGQRDGINVG 554
           M I+ +Y+V+K+GGLIY  D   PR E EKTF +PLD+ L+  +++V+VAFGQRDGI VG
Sbjct: 1   MAIFSVYVVNKAGGLIYQLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVG 60

Query: 555 HVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFGRVRATTNEKIVLASMFYPLFA 734
           H +L++NG  V GR T D ++V + +    NYP+S++FGR R T+NEK++LASMF+ LFA
Sbjct: 61  HAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLFA 120

Query: 735 LASQLSPYQ 761
           + SQLSP Q
Sbjct: 121 IGSQLSPEQ 129


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,166,168
Number of Sequences: 237096
Number of extensions: 2138690
Number of successful extensions: 3988
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3988
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)