Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_H21
         (958 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0751 + 31690411-31690443,31692900-31694240                       32   0.78 
07_03_0061 + 12972944-12973054,12974509-12974536,12974701-129748...    31   1.8  
04_04_0057 + 22410167-22411330                                         29   5.5  
05_03_0373 - 13194723-13195847,13196219-13196809                       29   7.2  
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424...    28   9.6  
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298...    28   9.6  

>01_06_0751 + 31690411-31690443,31692900-31694240
          Length = 457

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 607 ISEVPERVD-PQPPAAVLASSPFVTSQPLKTAAGF 708
           I E+P+R + P PPAA     P  T Q   T+ GF
Sbjct: 195 IDELPDRAEAPPPPAAASTEQPEATEQATSTSYGF 229


>07_03_0061 +
           12972944-12973054,12974509-12974536,12974701-12974870,
           12975878-12976043,12976122-12976425,12977155-12977350,
           12977464-12977622,12978311-12978371,12978904-12978967,
           12979099-12979346,12980039-12980250,12980344-12980456,
           12980547-12980623,12980710-12980873,12981493-12981564,
           12981565-12981760,12981813-12981854,12982358-12982440,
           12982534-12982671,12982942-12983124,12983216-12983263
          Length = 944

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 710 SNPAAVFSGCEVTKGLEARTAAGGCG-STRSGTSEMFSKIEGRSTFSSN 567
           S+ AA+   C +     ART+   CG   + GT  + SK+EG+  + ++
Sbjct: 71  SSAAAISDKCTIEVAKSARTSCRRCGEKIKKGTVRVSSKLEGQGWYHAS 119


>04_04_0057 + 22410167-22411330
          Length = 387

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 565 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSP 669
           WLE +V  P    N+ + P    P P AA  + SP
Sbjct: 164 WLESRVTCPLCRANLEKPPPPPPPPPAAAAASPSP 198


>05_03_0373 - 13194723-13195847,13196219-13196809
          Length = 571

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 510 VSEFGGTWFQLRR*WRVETRSVIDFDLRCSAR 415
           V+E G  + QL+R WR + R ++D D R   R
Sbjct: 502 VNEAGQRFLQLQREWRSDARGIVDGDGRFKFR 533


>10_08_0849 +
           21040043-21040199,21040620-21040678,21040925-21042494,
           21042583-21042710,21042793-21043033,21043160-21043710
          Length = 901

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +1

Query: 514 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVD 633
           L+ +L   C ++N+   +LE+++  P +FE +    +R+D
Sbjct: 754 LVLELSELCAEQNLEVWYLEDELISPCMFEELQNQGDRID 793


>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
            31029955-31030017,31031597-31031704,31031772-31031836,
            31031928-31032015,31032104-31032157,31032234-31032380,
            31033358-31033429,31034077-31034226,31034317-31034430,
            31034762-31034875,31035925-31036077,31037437-31037529,
            31038202-31038318,31038984-31039086,31039192-31039376,
            31039448-31039522,31040451-31040534,31041547-31041588,
            31041668-31041847,31042109-31042162,31042239-31042280,
            31042869-31042967,31043040-31043174,31043325-31043427,
            31045061-31045134,31045227-31045270,31045393-31045471,
            31045592-31045705,31045842-31045946,31046027-31046161,
            31046447-31046546,31046870-31046883,31046936-31047004,
            31047079-31047182,31047299-31047347,31047931-31048023,
            31048102-31048210,31048619-31048755,31048851-31048928,
            31049015-31049104,31049402-31049467,31049546-31049638,
            31049711-31049839,31050024-31050122,31051366-31051512,
            31051605-31051910
          Length = 2050

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 619  PERVDPQPPAAVLASSPFVTSQPLKTAAGFE-RYVLSITLTRQSRR 753
            PE+ +P PP  V A +      P   A G E R   +I LT ++R+
Sbjct: 1963 PEQQNPTPPNPVQAGASSEQQNPATAAEGVETRSTRTINLTERARQ 2008


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,769,404
Number of Sequences: 37544
Number of extensions: 394399
Number of successful extensions: 1048
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2764678640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)