Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_H20
         (1498 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   1.9  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   9.9  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   9.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   9.9  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 1284 PPPPPPPP 1261
            PPPPPPPP
Sbjct: 783  PPPPPPPP 790



 Score = 26.6 bits (56), Expect = 1.9
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 1284 PPPPPPPP 1261
            PPPPPPPP
Sbjct: 784  PPPPPPPP 791


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
            receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 1250 KXXXGGGGGGGG 1285
            K   GGGGGGGG
Sbjct: 552  KGGGGGGGGGGG 563


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
            coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 1250 KXXXGGGGGGGG 1285
            K   GGGGGGGG
Sbjct: 553  KGGGGGGGGGGG 564


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 1250 KXXXGGGGGGGG 1285
            K   GGGGGGGG
Sbjct: 1492 KGAGGGGGGGGG 1503


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,503
Number of Sequences: 2352
Number of extensions: 9806
Number of successful extensions: 526
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 175156245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)