Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_H15
(982 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.72
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.72
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 1.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 25 1.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.9
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.1
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 29 5.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.7
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 28 8.8
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 28 8.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 8.8
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.9 bits (69), Expect = 0.72
Identities = 25/80 (31%), Positives = 26/80 (32%)
Frame = -2
Query: 636 PPPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPXFXXKKXGXFFFXPPXGGP 457
PPPPP F + PPPP F P P F FF PP P
Sbjct: 305 PPPPPH---FMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPP---P 358
Query: 456 XFXPPKKXXXXXGGXXXTPP 397
F P GG T P
Sbjct: 359 HFMRPSS-PPTDGGPIITGP 377
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.72
Identities = 25/80 (31%), Positives = 26/80 (32%)
Frame = -2
Query: 636 PPPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPXFXXKKXGXFFFXPPXGGP 457
PPPPP F + PPPP F P P F FF PP P
Sbjct: 305 PPPPPH---FMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPP---P 358
Query: 456 XFXPPKKXXXXXGGXXXTPP 397
F P GG T P
Sbjct: 359 HFMRPSS-PPTDGGPIITGP 377
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -2
Query: 474 PPXGGPXFXPPKKXXXXXGGXXXTPPXXGXPPXXGGIGXXXF*XGXPKXXFXXXPPXXXP 295
P GGP PP GG PP G PP GG G P PP P
Sbjct: 708 PITGGPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/84 (28%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Frame = -2
Query: 636 PPPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPX-FXXKKXGXFFFXPPXGG 460
PPPPP PPPPP P PP G PP GG
Sbjct: 713 PPPPPGLP-----PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 459 PXFXPPKKXXXXXGGXXXTPPXXG 388
PP G PP G
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -2
Query: 474 PPXGGPXFXPPKKXXXXXGGXXXTPPXXGXPPXXGGIGXXXF*XGXPKXXFXXXPPXXXP 295
P GGP PP GG PP G PP GG G P PP P
Sbjct: 708 PITGGPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/84 (28%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Frame = -2
Query: 636 PPPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPX-FXXKKXGXFFFXPPXGG 460
PPPPP PPPPP P PP G PP GG
Sbjct: 713 PPPPPGLP-----PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 459 PXFXPPKKXXXXXGGXXXTPPXXG 388
PP G PP G
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -2
Query: 474 PPXGGPXFXPPKKXXXXXGGXXXTPPXXGXPPXXGGIGXXXF*XGXPKXXFXXXPPXXXP 295
P GGP PP GG PP G PP GG G P PP P
Sbjct: 291 PITGGPP--PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/84 (28%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Frame = -2
Query: 636 PPPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPX-FXXKKXGXFFFXPPXGG 460
PPPPP PPPPP P PP G PP GG
Sbjct: 296 PPPPPGLP-----PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 459 PXFXPPKKXXXXXGGXXXTPPXXG 388
PP G PP G
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPPPPG 374
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.1 bits (57), Expect(2) = 1.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -2
Query: 636 PPPPPXXXFFXXKKXXXXXPPPPP 565
PPPPP PPPPP
Sbjct: 520 PPPPPMPGMAPLSTGAPTPPPPPP 543
Score = 26.2 bits (55), Expect(2) = 4.2
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 4/29 (13%)
Frame = -1
Query: 637 PPPPXXFXFFXXK----KKXXGXPPPPPP 563
PPPP K G PPPPPP
Sbjct: 553 PPPPLPLDLLKGAVAGLKSVPGGPPPPPP 581
Score = 22.2 bits (45), Expect(2) = 1.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 579 PPPPPXFXF 553
PPPPP F F
Sbjct: 581 PPPPPSFMF 589
Score = 21.4 bits (43), Expect(2) = 4.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 580 PPPPPPFXF 554
PPPPPP F
Sbjct: 579 PPPPPPPSF 587
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 24.6 bits (51), Expect(3) = 1.7
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = -2
Query: 636 PPPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPXFXXKK 496
PPPPP P PPP F P P KK
Sbjct: 1356 PPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKK 1402
Score = 21.8 bits (44), Expect(3) = 1.7
Identities = 10/32 (31%), Positives = 10/32 (31%)
Frame = -2
Query: 474 PPXGGPXFXPPKKXXXXXGGXXXTPPXXGXPP 379
PP PP G PP G PP
Sbjct: 1427 PPSQNQYSMPPPVMGGHEGSWRGGPPMRGMPP 1458
Score = 20.6 bits (41), Expect(3) = 1.7
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 402 PPXXGXPPXXGG 367
PP G PP GG
Sbjct: 1490 PPMRGGPPMRGG 1501
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -3
Query: 635 PPPXPXXXFXXKKKXXXXXPPPPPXFXFXXXXXKXGGXPPP 513
PPP P F PPPPP G PPP
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 652
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = -1
Query: 637 PPPPXXFXFFXXKKKXXGXPPPPPPFXFXXXXXKKXEAXPP 515
PPPP F PPPPPP PP
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 654
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 636 PPPPPXXXFFXXKKXXXXXPPPPP 565
PPPPP F PPPPP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPP 634
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -3
Query: 635 PPPXPXXXFXXKKKXXXXXPPPPPXFXFXXXXXKXGGXPPP 513
PPP P F PPPPP G PPP
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 478
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = -1
Query: 637 PPPPXXFXFFXXKKKXXGXPPPPPPFXFXXXXXKKXEAXPP 515
PPPP F PPPPPP PP
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 480
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 636 PPPPPXXXFFXXKKXXXXXPPPPP 565
PPPPP F PPPPP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPP 460
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = -2
Query: 633 PPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPXFXXKKXGXFFFXPPXGGP 457
PPPP F PPPPP + P PP + G + PP P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP---PPPPRYPSAGPGMYPPPPPSRPP 372
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = -2
Query: 633 PPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPXFXXKKXGXFFFXPPXGGP 457
PPPP F PPPPP + P PP + G + PP P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP---PPPPRYPSAGPGMYPPPPPSRPP 382
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/89 (25%), Positives = 23/89 (25%), Gaps = 1/89 (1%)
Frame = -2
Query: 633 PPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPX-FXXKKXGXFFFXPPXGGP 457
PPPP PPPPP P PP PP G
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 456 XFXPPKKXXXXXGGXXXTPPXXGXPPXXG 370
PP G P G PP G
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/89 (25%), Positives = 23/89 (25%), Gaps = 1/89 (1%)
Frame = -2
Query: 633 PPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPX-FXXKKXGXFFFXPPXGGP 457
PPPP PPPPP P PP PP G
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 456 XFXPPKKXXXXXGGXXXTPPXXGXPPXXG 370
PP G P G PP G
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/89 (25%), Positives = 23/89 (25%), Gaps = 1/89 (1%)
Frame = -2
Query: 633 PPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPX-FXXKKXGXFFFXPPXGGP 457
PPPP PPPPP P PP PP G
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 456 XFXPPKKXXXXXGGXXXTPPXXGXPPXXG 370
PP G P G PP G
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/79 (25%), Positives = 22/79 (27%)
Frame = -2
Query: 636 PPPPPXXXFFXXKKXXXXXPPPPPXFXFXXXXXKXXRPXPPXFXXKKXGXFFFXPPXGGP 457
PPPPP F PPPPP RP P + + P P
Sbjct: 55 PPPPPCPAQF-CPPPPICPPPPPPPMPCPPPPPPMPRPSCPCMMQRPSFYPSYVPQYYQP 113
Query: 456 XFXPPKKXXXXXGGXXXTP 400
P GG P
Sbjct: 114 MMPQPMPTAGGCGGGAVVP 132
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 637 PPPPXXFXFFXXKKKXXGXPPPPPP 563
PPPP G PPPPPP
Sbjct: 95 PPPPPMMGGIPPPPPMFGAPPPPPP 119
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = -3
Query: 635 PPPXPXXXFXXKKKXXXXXPPPPPXF--XFXXXXXKXGGXPPP 513
PPP P F PPPPP F GG PPP
Sbjct: 66 PPPVPN-GFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -2
Query: 486 FFFXPPXGGPXFXPPKKXXXXXGGXXXTPPXXGXPPXXGGIG 361
FF P GGP P+ GG PP G P GG G
Sbjct: 208 FFTQPRGGGPAPGAPRAGGSGAGGAPRPPPPAG-PRAFGGSG 248
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 645 KXXPPPPPXXXFFXXKKXXXXXPPPPP 565
K PPPPP PPPPP
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPPPP 520
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 558 KXGGGGGGXPXXFFFXXKXXXXXGGGG 638
K GGGGGG P + GGGG
Sbjct: 336 KSGGGGGGIPGQSVYMGAGGGGGGGGG 362
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 558 KXGGGGGGXPXXFFFXXKXXXXXGGGG 638
K GGGGGG P + GGGG
Sbjct: 230 KSGGGGGGIPGQSVYMGAGGGGGGGGG 256
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 636 PPPPPXXXFFXXKKXXXXXPPPPP 565
PPPPP ++ PPPPP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPP 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,515,822
Number of Sequences: 27780
Number of extensions: 287311
Number of successful extensions: 1476
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2552786072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -