Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_H13
         (999 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   0.41 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.88 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.7  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 652 GXXPSPIXXGGGGGXG 699
           G   SP+  GGGGG G
Sbjct: 5   GWPASPLRAGGGGGGG 20



 Score = 23.4 bits (48), Expect(2) = 0.41
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 681 GGGGGGGXP 707
           GGGGGGG P
Sbjct: 18  GGGGGGGGP 26



 Score = 23.0 bits (47), Expect(2) = 0.41
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 651 GXXSLPXPXXGGGGGGG 701
           G  + P    GGGGGGG
Sbjct: 5   GWPASPLRAGGGGGGGG 21


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.88
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +3

Query: 639 GGXXGXXSLPXPXXGGGGGG 698
           GG  G    P P  GGGGGG
Sbjct: 213 GGGGGSSGGPGPGGGGGGGG 232


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = -1

Query: 714 GXGXXPXPPPPPXXDXGGXXXPXP 643
           G G  P PPPPP         P P
Sbjct: 779 GIGSPPPPPPPPPSSLSPGGVPRP 802



 Score = 22.6 bits (46), Expect(2) = 1.8
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +2

Query: 875 PPPPPPXXKXXKXXXPPP 928
           PPPPPP         P P
Sbjct: 785 PPPPPPPSSLSPGGVPRP 802



 Score = 21.4 bits (43), Expect(2) = 1.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 863 SXXXPPPPPP 892
           S   PPPPPP
Sbjct: 782 SPPPPPPPPP 791


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = -3

Query: 700 PPPPPPPXXGXGREXXPXXPPXXGXXGGXXG 608
           PPP PPP    G    P  P   G  GG  G
Sbjct: 581 PPPAPPPPPPMG---PPPSPLAGGPLGGPAG 608



 Score = 24.6 bits (51), Expect = 4.7
 Identities = 13/53 (24%), Positives = 15/53 (28%)
 Frame = +3

Query: 516 PPPPXXGGGGXFFXXXXFXXPPXXPXKKXXXPXXPPSXPXXGGXXGXXSLPXP 674
           PPPP   GG        F  PP    +    P  P       G     +   P
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPP 582



 Score = 23.8 bits (49), Expect = 8.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 700 PPPPPPP 680
           PPPPPPP
Sbjct: 530 PPPPPPP 536



 Score = 23.8 bits (49), Expect = 8.2
 Identities = 12/42 (28%), Positives = 13/42 (30%)
 Frame = +3

Query: 873 PPPPPPXXXKXKKXXXXPXXSSXXGAXPXXPQXXXXXXXPPP 998
           PPPPPP           P      G+ P  P         PP
Sbjct: 585 PPPPPPMGPPPSPLAGGP-LGGPAGSRPPLPNLLGFGGAAPP 625


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,713
Number of Sequences: 2352
Number of extensions: 12473
Number of successful extensions: 207
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 109763433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)