Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_H08
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.6  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   9.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.9  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +1

Query: 118 CPPQXVGWGRVGPDAPAGGVQRRRSASGLAAXTDVTRLDDSRP 246
           CPPQ V   RV P+A      +       AA   + RL    P
Sbjct: 53  CPPQGVDLKRVLPEALQTNCAKCTEKQRTAAYRSIKRLKKEYP 95


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 839 TTTKDKGFALIYWIC*LLR 783
           T TK+ GF   Y +C LL+
Sbjct: 360 TYTKESGFLAYYEVCELLQ 378


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -2

Query: 578 CQPCLKLRSIDISL*T*LKLHANIPL*RCYM*XKEVVNACNV 453
           CQ C K  + D  L T ++LH      RC    ++ V   N+
Sbjct: 12  CQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANL 53


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -2

Query: 578 CQPCLKLRSIDISL*T*LKLHANIPL*RCYM*XKEVVNACNV 453
           CQ C K  + D  L T ++LH      RC    ++ V   N+
Sbjct: 165 CQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANL 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,515
Number of Sequences: 336
Number of extensions: 3423
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)