Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_H06
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1125 - 26327433-26328239                                         34   0.18 
05_05_0086 + 22280463-22280548,22281289-22281394,22281923-222820...    31   1.6  
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819...    30   2.9  
02_01_0030 - 183836-183903,183986-184453,184526-184604,184698-18...    30   2.9  
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788...    29   6.6  
04_04_0775 - 27989704-27990281,27990407-27990653,27990743-279908...    28   8.8  

>12_02_1125 - 26327433-26328239
          Length = 268

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 439 GRAVRPPGTPGSSSDILHTPPWRRRCSRVG 350
           G AVRP G+P   S +   PPWR + S  G
Sbjct: 104 GSAVRPNGSPWRGSAVSREPPWRGQASAAG 133


>05_05_0086 +
           22280463-22280548,22281289-22281394,22281923-22282008,
           22290700-22290925
          Length = 167

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 144 FPGHAPPRRYQSEAVAPSGRRP 209
           FP +AP R + ++A  P GRRP
Sbjct: 96  FPSYAPDRGFDADAALPPGRRP 117


>07_03_1339 + 25879246-25881154,25881502-25881696,25881777-25881928,
            25882147-25882607,25883723-25883810,25884066-25884135,
            25884288-25884361,25884456-25884524,25884647-25884724,
            25884946-25885070,25885168-25885240,25885508-25885566,
            25885650-25886027,25886134-25886236,25886332-25886544
          Length = 1348

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = -3

Query: 412  PGSSSDILHTPPWRRRCSRVGNRTRCSTTRTVAANVSTVFVQKSNCKRIVEPSPW 248
            P  ++ +LH   +   CSRV  R+   +TR   + V  +F+ + N   + E + W
Sbjct: 1085 PILAAPVLHISGFGASCSRVWQRSSYWSTRQSQSKVYPLFIPRKNNCSVGEDNSW 1139


>02_01_0030 -
           183836-183903,183986-184453,184526-184604,184698-185183
          Length = 366

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = -3

Query: 418 GTPGSSSDILHTPP--WRRRCSRVGNRTRCSTTRTVAANVS--TVFVQKSNCKRI 266
           G P  S+  +  PP  W +R S  G R + STT T AA  +  T  V+K + K++
Sbjct: 22  GAPRPSTCSVFYPPRCWSKRSSGNGVRAQASTTETTAAPAAEVTTKVEKVSKKQV 76


>03_06_0209 -
           32377045-32378008,32378086-32378210,32378772-32378816,
           32379009-32379295,32379778-32381509,32381631-32381971,
           32383753-32383876,32384484-32384722,32385156-32385534
          Length = 1411

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -2

Query: 476 GTAVASTPSARPWEGG 429
           GTA+ S PS RPWE G
Sbjct: 172 GTALDSAPSCRPWERG 187


>04_04_0775 -
           27989704-27990281,27990407-27990653,27990743-27990837,
           27990918-27992388,27993142-27993194,27993295-27993430
          Length = 859

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = +1

Query: 250 MARALRFACSLISEQILSKHLQQRYASYYSGFGSRLVSSDVSMEECEEYLKKSQGSRGDA 429
           + R LR A S   + ++S   Q+  ++    F    +S+ +   ECE+  K S   +   
Sbjct: 355 LKRRLRLAISNNRKDVMSSTFQKDDSTQQ--FILESMSTSMDSSECEKAEKPSIVDKKTI 412

Query: 430 PPSQGRALGVDAT 468
           P   G  +G DAT
Sbjct: 413 PEDSGSGMGNDAT 425


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,025,800
Number of Sequences: 37544
Number of extensions: 406640
Number of successful extensions: 1192
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)