Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_G21
         (889 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.25 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   2.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.4  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   5.4  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +1

Query: 799 PXGXXXKPXXSPPKNPPXPPXXXPP 873
           P G    P   PP  PP PP   PP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPP 594



 Score = 27.1 bits (57), Expect = 0.76
 Identities = 21/68 (30%), Positives = 21/68 (30%)
 Frame = -1

Query: 685 PXXQRFFXGVPPXXGGXXXPPXXGGXXPPPPXXXXXXXFFWGXXGGXXKKXPPXPXGGGX 506
           P   RF  G P        P       PPPP          G  GG     PP P   G 
Sbjct: 564 PAQLRFPAGFPNLPNAQPPP----APPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLG- 618

Query: 505 FFXGKXPP 482
            F G  PP
Sbjct: 619 -FGGAAPP 625


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect(2) = 2.0
 Identities = 9/23 (39%), Positives = 9/23 (39%)
 Frame = -3

Query: 659 GXPXXGGKXXAPXXGGXXPPPPP 591
           G P       A   G   PPPPP
Sbjct: 767 GMPSPSRSAFADGIGSPPPPPPP 789



 Score = 21.0 bits (42), Expect(2) = 2.0
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 488 PPPPPP 471
           PPPPPP
Sbjct: 785 PPPPPP 790


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +1

Query: 502 KXXPPPXGXGGXFXGAPPXXPKKXXXXXXXGGGGG 606
           K   P  G GG   GAP             GGGGG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 478 GGGGXXPKKXXPPP 519
           GGGG   KK  PPP
Sbjct: 245 GGGGSSSKKGGPPP 258


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.154    0.525 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,737
Number of Sequences: 2352
Number of extensions: 12228
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)