Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_G20
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 45 8e-05
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 45 8e-05
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 39 0.004
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 36 0.029
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical p... 28 7.6
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 28 7.6
AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical ... 28 7.6
AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear recep... 28 7.6
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +1
Query: 379 TGHSCRVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYXXXKLXXKAIXNXIDXXXV 558
+G+S I LGT P ++TA+ GYR ID A++Y K +A+ +D V
Sbjct: 9 SGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKV 68
Query: 559 RRXXXFIXGXI 591
+R FI +
Sbjct: 69 KREELFITSKV 79
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +1
Query: 379 TGHSCRVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYXXXKLXXKAIXNXIDXXXV 558
+G+S I LGT P ++TA+ GYR ID A++Y K +A+ +D V
Sbjct: 9 SGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKV 68
Query: 559 RRXXXFIXGXI 591
+R FI +
Sbjct: 69 KREELFITSKV 79
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +1
Query: 376 ATGHSCRVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYXXXKLXXKAIXNXIDXXX 555
+ G VI LGT P V+TA+ GYR IDTA +Y + AI ++
Sbjct: 11 SNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGV 70
Query: 556 VRRXXXFI 579
V+R FI
Sbjct: 71 VKREELFI 78
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 379 TGHSCRVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYXXXKLXXKAIXNXIDXXXV 558
TG+ C +I LGT + +++ A+ GYR DTA +Y K A+ + +
Sbjct: 7 TGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLPKHNL 66
Query: 559 RRXXXFI 579
+R FI
Sbjct: 67 KREDIFI 73
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +1
Query: 379 TGHSCRVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYXXXKLXXKAIXNXIDXXXV 558
+G+ VI GT LP L E V A++ GYR ID+A + + I + V
Sbjct: 11 SGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWCKIRKV 70
Query: 559 RRXXXFIXGXI 591
RR F+ I
Sbjct: 71 RREELFLSSKI 81
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 379 TGHSCRVIALGTALLPPRLT-TEIVETAIDMGYRAIDTAYIYXXXKLXXKAIXNXIDXXX 555
TG + LGT + T + A+D GYR IDTA++Y + K + I
Sbjct: 10 TGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISSGK 69
Query: 556 VRRXXXFI 579
++R F+
Sbjct: 70 LKREDIFV 77
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 32.3 bits (70), Expect = 0.47
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +1
Query: 376 ATGHSCRVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYXXXKLXXKAIXNXIDXXX 555
+ HS + LGT V+ A+ GY IDTA Y + AI I
Sbjct: 51 SNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGV 110
Query: 556 VRRXXXFI 579
V+R FI
Sbjct: 111 VKREDLFI 118
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 373 YATGHSCRVIALGTALLPPRLTTEI-VETAIDMGYRAIDTAYIYXXXKLXXKAIXNXIDX 549
++ G+ I LG + + + ++ +E A+ GYR DTA +Y ++ +
Sbjct: 14 FSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQ 73
Query: 550 XXVRRXXXFI 579
+ R FI
Sbjct: 74 FGLTREDVFI 83
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical
protein C16A3.3 protein.
Length = 1743
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = -3
Query: 235 LPGDSILTEVIFLNTKKHNMNQIIFILFDFTKDFQNKN*KNIQKSSIF*N*ASSLDDGSA 56
LPG + + N +K N+++F+L D N +N +K + + DG
Sbjct: 556 LPGTPKNNDFVVANVEKIEDNRVVFVLRDVNPSAAVANGQNSEKKLVQ---RPNPADGGI 612
Query: 55 SKGKILRNSL 26
S GKI + SL
Sbjct: 613 SIGKIYKGSL 622
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +1
Query: 400 IALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYXXXKLXXKAIXNXIDXXXVRRXXXFI 579
I LGT + ++ A+ GYR IDTA +Y A+ ++R FI
Sbjct: 19 IGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALAELFAEGILKREDIFI 78
>Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +3
Query: 153 NKMKIIWFILCFFVFRKITSVKMESPGSGQRRLDNGKQKRDTGDLTDEQYKTRIAELNEA 332
N + F C FV KI +VKM+ + +++ + D G + E ++T + A
Sbjct: 86 NACRYCRFHRCLFVGMKIEAVKMDRKLTKRKKEKTDEDDTDDGG-SHESFET-TTDAKRA 143
Query: 333 KLKGSVKEVATLKLRDGTFMPGHS 404
K S+ +++L+L D T G++
Sbjct: 144 KFDNSLL-ISSLQLIDKTSSAGNA 166
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = +1
Query: 379 TGHSCRVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYXXXKLXXKAIXNXIDXXXV 558
+G++ + GT + ++ A+ GYR DTA Y K +A+ + +
Sbjct: 17 SGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHGL 76
Query: 559 RRXXXFI 579
R F+
Sbjct: 77 SRSDVFL 83
>AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +3
Query: 153 NKMKIIWFILCFFVFRKITSVKMESPGSGQRRLDNGKQKRDTGDLTDEQYKTRIAELNEA 332
N + F C FV KI +VKM+ + +++ + D G + E ++T + A
Sbjct: 86 NACRYCRFHRCLFVGMKIEAVKMDRKLTKRKKEKTDEDDTDDGG-SHESFET-TTDAKRA 143
Query: 333 KLKGSVKEVATLKLRDGTFMPGHS 404
K S+ +++L+L D T G++
Sbjct: 144 KFDNSLL-ISSLQLIDKTSSAGNA 166
>AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear receptor
NHR-97 protein.
Length = 439
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +3
Query: 153 NKMKIIWFILCFFVFRKITSVKMESPGSGQRRLDNGKQKRDTGDLTDEQYKTRIAELNEA 332
N + F C FV KI +VKM+ + +++ + D G + E ++T + A
Sbjct: 86 NACRYCRFHRCLFVGMKIEAVKMDRKLTKRKKEKTDEDDTDDGG-SHESFET-TTDAKRA 143
Query: 333 KLKGSVKEVATLKLRDGTFMPGHS 404
K S+ +++L+L D T G++
Sbjct: 144 KFDNSLL-ISSLQLIDKTSSAGNA 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,781,687
Number of Sequences: 27780
Number of extensions: 225152
Number of successful extensions: 740
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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