Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_G15
         (1028 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92775-3|CAB62778.2|  396|Caenorhabditis elegans Hypothetical pr...    35   0.082
AB070577-1|BAC66472.1|  396|Caenorhabditis elegans L-3,4-dihydro...    35   0.082
Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical p...    29   4.1  
U41992-7|AAA83358.1|  374|Caenorhabditis elegans Hypothetical pr...    29   7.1  
AL021172-1|CAA15962.1|  315|Caenorhabditis elegans Hypothetical ...    29   7.1  
AF056579-1|AAC78601.1|  315|Caenorhabditis elegans high mobility...    29   7.1  

>Z92775-3|CAB62778.2|  396|Caenorhabditis elegans Hypothetical
           protein C06H5.7 protein.
          Length = 396

 Score = 35.1 bits (77), Expect = 0.082
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = -2

Query: 391 IFAWPSTTSTFTLALDSRFFLGTFWSASTSFSYWCLFIIRRLSRIFCSGGSWRPTSFFKF 212
           +  W        + ++S FF+G+FWSA  S+   C   + +L  +      W+P  + K+
Sbjct: 98  VLTWHDINRDMVVVIES-FFIGSFWSAMVSY---CSLSVLKLFAV------WKPFHYRKW 147

Query: 211 FRLRLC 194
           F +R C
Sbjct: 148 FTMRRC 153


>AB070577-1|BAC66472.1|  396|Caenorhabditis elegans
           L-3,4-dihydroxyphenylalanine receptorprotein.
          Length = 396

 Score = 35.1 bits (77), Expect = 0.082
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = -2

Query: 391 IFAWPSTTSTFTLALDSRFFLGTFWSASTSFSYWCLFIIRRLSRIFCSGGSWRPTSFFKF 212
           +  W        + ++S FF+G+FWSA  S+   C   + +L  +      W+P  + K+
Sbjct: 98  VLTWHDINRDMVVVIES-FFIGSFWSAMVSY---CSLSVLKLFAV------WKPFHYRKW 147

Query: 211 FRLRLC 194
           F +R C
Sbjct: 148 FTMRRC 153


>Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical
           protein C25A1.10a protein.
          Length = 971

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 197 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVA 298
           +P +K    +  P P A + + S+ SSDDE+ PVA
Sbjct: 321 KPAAKPTPAKATPKPVAKKAESSSDSSDDEKKPVA 355



 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 197 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVA 298
           +P +K    +  P P A + + S+ SSDDE+ PVA
Sbjct: 383 KPAAKPTPAKATPKPVAKKAESSSDSSDDEKKPVA 417



 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 197 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVA 298
           +P +K       P P A + + S+ SSDDE+ PVA
Sbjct: 505 KPAAKPTPANATPKPVAKKAESSSDSSDDEKKPVA 539



 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 200 PESKELKKRGRPPAATRTKDSAKSSDDEQAPVA 298
           P  K   K    P A + + S+ SSDDE+ P A
Sbjct: 292 PAKKTPAKAAPKPVAKKAESSSDSSDDEKKPAA 324


>U41992-7|AAA83358.1|  374|Caenorhabditis elegans Hypothetical
           protein F32E10.6 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = +2

Query: 158 EKXGRGXPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVA 298
           +K  +     +  + E +E+K++    ++  TK +A   D+E+ PVA
Sbjct: 190 KKSAKSKDDDSSDEEEEEEVKEKSPKKSSKSTKRAASDDDEEEEPVA 236


>AL021172-1|CAA15962.1|  315|Caenorhabditis elegans Hypothetical
           protein Y17G7A.1 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +2

Query: 134 SDDGSTVVEKXGRGXPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPV 295
           +D GS+ V+K GRG P  N +      L K+GR   A        + D   +PV
Sbjct: 112 NDTGSSPVKK-GRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASSPV 164


>AF056579-1|AAC78601.1|  315|Caenorhabditis elegans high mobility
           group protein I beta protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +2

Query: 134 SDDGSTVVEKXGRGXPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPV 295
           +D GS+ V+K GRG P  N +      L K+GR   A        + D   +PV
Sbjct: 112 NDTGSSPVKK-GRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASSPV 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,051,576
Number of Sequences: 27780
Number of extensions: 195492
Number of successful extensions: 678
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2720181880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)