Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_G13
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.0  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   9.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 692 GXGEKXKXGGGXXPGGGFLXXXKXGGXP 775
           G G   + GGG   GGG+      GG P
Sbjct: 82  GRGRGGRDGGGGFGGGGYGDRNGDGGRP 109


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 9/75 (12%)
 Frame = -1

Query: 870 PXPPPXRGXXXXF--LFXXPPXG--KXP-----PXXXXFYXGXPPXXXXXKNPPPGXXPP 718
           P PPP  G        F  PP    + P     P    F  G P        PPP   PP
Sbjct: 531 PPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFP--NLPNAQPPPAPPPP 588

Query: 717 PXXYFSPXPPXXGGG 673
           P     P P    GG
Sbjct: 589 PP--MGPPPSPLAGG 601


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 689 GGXGEKXKXGGGXXPGGGFL 748
           GG  +    GGG   GGGFL
Sbjct: 938 GGNKDVLDGGGGGGGGGGFL 957


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,092
Number of Sequences: 2352
Number of extensions: 8453
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)