Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_G13
(870 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein. 41 0.007
M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small nuc... 41 0.007
CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein. 41 0.007
AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear ribonucle... 41 0.007
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 40 0.009
AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor... 40 0.009
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 40 0.009
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 40 0.009
X16163-1|CAA34288.1| 218|Homo sapiens SmB /B' autoimmune antige... 38 0.062
X15892-1|CAA33901.1| 240|Homo sapiens protein ( Human hcerN3 ge... 38 0.062
U41303-1|AAA98969.1| 240|Homo sapiens small nuclear ribonuleopr... 38 0.062
J04615-1|AAA36617.1| 240|Homo sapiens protein ( Human lupus aut... 38 0.062
CR450350-1|CAG29346.1| 240|Homo sapiens SNRPN protein. 38 0.062
BC025178-1|AAH25178.1| 240|Homo sapiens small nuclear ribonucle... 38 0.062
BC024777-1|AAH24777.1| 240|Homo sapiens SNURF protein protein. 38 0.062
BC003180-1|AAH03180.1| 240|Homo sapiens small nuclear ribonucle... 38 0.062
BC000611-1|AAH00611.1| 240|Homo sapiens SNRPN protein protein. 38 0.062
AK222633-1|BAD96353.1| 240|Homo sapiens small nuclear ribonucle... 38 0.062
AF400432-1|AAK92481.1| 240|Homo sapiens small nuclear ribonucle... 38 0.062
BC141917-1|AAI41918.1| 198|Homo sapiens PRB1 protein protein. 34 0.58
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 34 0.77
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 34 0.77
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 34 0.77
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 34 0.77
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 34 0.77
X17567-1|CAB57867.1| 231|Homo sapiens snRNP B protein protein. 33 1.0
X15893-1|CAA33902.1| 231|Homo sapiens protein ( Human B cod gen... 33 1.0
M34081-1|AAA36578.1| 224|Homo sapiens protein ( Human small nuc... 33 1.0
BC080516-1|AAH80516.1| 231|Homo sapiens small nuclear ribonucle... 33 1.0
BC003530-1|AAH03530.1| 234|Homo sapiens SNRPB protein protein. 33 1.0
AY742712-1|AAU89981.1| 231|Homo sapiens small nuclear ribonucle... 33 1.0
AL049650-7|CAB46714.1| 231|Homo sapiens small nuclear ribonucle... 33 1.0
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein. 33 1.0
J04564-1|AAA60151.1| 285|Homo sapiens SNRPB protein. 32 2.3
AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant pr... 32 2.3
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 32 3.1
U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein. 31 4.1
BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif prote... 31 4.1
AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens ... 31 4.1
AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrom... 31 4.1
AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein. 31 4.1
X85133-1|CAA59445.1| 948|Homo sapiens RB protein binding protei... 31 5.4
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 31 5.4
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 31 5.4
K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary ... 31 5.4
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 31 5.4
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 31 5.4
BC064553-1|AAH64553.1| 187|Homo sapiens PRH1 protein protein. 31 5.4
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 31 5.4
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 31 5.4
BC033715-1|AAH33715.1| 816|Homo sapiens Similar to collagen, ty... 31 5.4
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 31 5.4
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 31 5.4
AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular... 31 5.4
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 31 5.4
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 31 5.4
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 31 5.4
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 31 5.4
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 31 5.4
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 31 5.4
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 31 5.4
AF352051-1|AAL05625.1| 1616|Homo sapiens proliferation potential... 31 5.4
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 31 5.4
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 31 5.4
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 31 5.4
AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein. 31 5.4
AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding ... 31 5.4
AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding ... 31 5.4
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 31 5.4
X07882-1|CAA30729.1| 226|Homo sapiens Po protein protein. 31 7.2
X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein. 31 7.2
S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein. 31 7.2
K03207-1|AAA60188.1| 247|Homo sapiens salivary proline-rich pro... 31 7.2
BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein. 31 7.2
BC051816-1|AAH51816.1| 454|Homo sapiens family with sequence si... 31 7.2
BC037240-1|AAH37240.2| 454|Homo sapiens family with sequence si... 31 7.2
AL161656-2|CAC21464.1| 403|Homo sapiens family with sequence si... 31 7.2
AL161656-1|CAC21463.1| 454|Homo sapiens family with sequence si... 31 7.2
AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens ... 31 7.2
AK056353-1|BAB71160.1| 454|Homo sapiens protein ( Homo sapiens ... 31 7.2
AK026029-1|BAB15328.1| 403|Homo sapiens protein ( Homo sapiens ... 31 7.2
AF134825-1|AAD54489.1| 243|Homo sapiens small nuclear ribonucle... 31 7.2
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 30 9.5
AF319523-1|AAK18178.1| 123|Homo sapiens RT-LI protein. 30 9.5
AF134832-1|AAD54487.1| 47|Homo sapiens small nuclear ribonucle... 30 9.5
>X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein.
Length = 240
Score = 40.7 bits (91), Expect = 0.007
Identities = 25/69 (36%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP RG + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPMGRGAPPPGMMGPPP-GMRPPMGPPM--GIPPGRGTPMGMPPPGMRPPPPGMRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB' mRNA, 3' end. ).
Length = 233
Score = 40.7 bits (91), Expect = 0.007
Identities = 25/69 (36%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP RG + PP G PP G PP PPPG PPP P
Sbjct: 168 PPPPMGRGAPPPGMMGPPP-GMRPPMGPPM--GIPPGRGTPMGMPPPGMRPPPPGMRGPP 224
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 225 PPGMRPPRP 233
>CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein.
Length = 240
Score = 40.7 bits (91), Expect = 0.007
Identities = 25/69 (36%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP RG + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPMGRGAPPPGMMGPPP-GMRPPMGPPM--GIPPGRGTPMGMPPPGMRPPPPGMRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 240
Score = 40.7 bits (91), Expect = 0.007
Identities = 25/69 (36%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP RG + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPMGRGAPPPGMMGPPP-GMRPPMGPPM--GIPPGRGTPMGMPPPGMRPPPPGMRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 40.3 bits (90), Expect = 0.009
Identities = 26/83 (31%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFS--- 700
P PPP ++ PP G PP G PP PPP PPP +
Sbjct: 257 PPPPPFTS----YIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPP---PPPDQFAPPGV 309
Query: 699 PXPPXXGGGRPRXFPRXXXKKTP 631
P PP G P FP + P
Sbjct: 310 PPPPATPGAAPLAFPPPPSQAAP 332
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/79 (25%), Positives = 24/79 (30%)
Frame = -3
Query: 862 PPXPXGXXXFFIXXXPXRKXXPXQXXFLXGXAPXFXXX*KPPPGXXXPPXFXFFPPPPXX 683
PP P + + P P G P F PPP PPPP
Sbjct: 256 PPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPAT 315
Query: 682 XGGKTPXFPPXXXKKNPXL 626
G FPP + P +
Sbjct: 316 PGAAPLAFPPPPSQAAPDM 334
>AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor
2D/deleted in azoospermia associated protein 1 fusion p
protein.
Length = 474
Score = 40.3 bits (90), Expect = 0.009
Identities = 26/83 (31%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFS--- 700
P PPP ++ PP G PP G PP PPP PPP +
Sbjct: 324 PPPPPFTS----YIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPP---PPPDQFAPPGV 376
Query: 699 PXPPXXGGGRPRXFPRXXXKKTP 631
P PP G P FP + P
Sbjct: 377 PPPPATPGAAPLAFPPPPSQAAP 399
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/79 (25%), Positives = 24/79 (30%)
Frame = -3
Query: 862 PPXPXGXXXFFIXXXPXRKXXPXQXXFLXGXAPXFXXX*KPPPGXXXPPXFXFFPPPPXX 683
PP P + + P P G P F PPP PPPP
Sbjct: 323 PPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPAT 382
Query: 682 XGGKTPXFPPXXXKKNPXL 626
G FPP + P +
Sbjct: 383 PGAAPLAFPPPPSQAAPDM 401
>AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32288 fis, clone PROST2000325, highly similar to
Homo sapiens DAZ associated protein 1 (DAZAP1) mRNA. ).
Length = 289
Score = 40.3 bits (90), Expect = 0.009
Identities = 26/83 (31%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFS--- 700
P PPP ++ PP G PP G PP PPP PPP +
Sbjct: 168 PPPPPFTS----YIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPP---PPPDQFAPPGV 220
Query: 699 PXPPXXGGGRPRXFPRXXXKKTP 631
P PP G P FP + P
Sbjct: 221 PPPPATPGAAPLAFPPPPSQAAP 243
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/79 (25%), Positives = 24/79 (30%)
Frame = -3
Query: 862 PPXPXGXXXFFIXXXPXRKXXPXQXXFLXGXAPXFXXX*KPPPGXXXPPXFXFFPPPPXX 683
PP P + + P P G P F PPP PPPP
Sbjct: 167 PPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPAT 226
Query: 682 XGGKTPXFPPXXXKKNPXL 626
G FPP + P +
Sbjct: 227 PGAAPLAFPPPPSQAAPDM 245
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 40.3 bits (90), Expect = 0.009
Identities = 26/83 (31%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFS--- 700
P PPP ++ PP G PP G PP PPP PPP +
Sbjct: 257 PPPPPFTS----YIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPP---PPPDQFAPPGV 309
Query: 699 PXPPXXGGGRPRXFPRXXXKKTP 631
P PP G P FP + P
Sbjct: 310 PPPPATPGAAPLAFPPPPSQAAP 332
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/79 (25%), Positives = 24/79 (30%)
Frame = -3
Query: 862 PPXPXGXXXFFIXXXPXRKXXPXQXXFLXGXAPXFXXX*KPPPGXXXPPXFXFFPPPPXX 683
PP P + + P P G P F PPP PPPP
Sbjct: 256 PPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPAT 315
Query: 682 XGGKTPXFPPXXXKKNPXL 626
G FPP + P +
Sbjct: 316 PGAAPLAFPPPPSQAAPDM 334
>X16163-1|CAA34288.1| 218|Homo sapiens SmB /B' autoimmune antigene
protein.
Length = 218
Score = 37.5 bits (83), Expect = 0.062
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP R + PP G PP G PP PPPG PPP P
Sbjct: 153 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPP 209
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 210 PPGMRPPRP 218
>X15892-1|CAA33901.1| 240|Homo sapiens protein ( Human hcerN3 gene
mRNA for N snRNP associated protein. ).
Length = 240
Score = 37.5 bits (83), Expect = 0.062
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP R + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>U41303-1|AAA98969.1| 240|Homo sapiens small nuclear
ribonuleoprotein particle N protein.
Length = 240
Score = 37.5 bits (83), Expect = 0.062
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP R + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>J04615-1|AAA36617.1| 240|Homo sapiens protein ( Human lupus
autoantigen (small nuclear ribonuclepoprotein, snRNP,
SM-D) mRNA, complete cds. ).
Length = 240
Score = 37.5 bits (83), Expect = 0.062
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP R + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>CR450350-1|CAG29346.1| 240|Homo sapiens SNRPN protein.
Length = 240
Score = 37.5 bits (83), Expect = 0.062
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP R + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>BC025178-1|AAH25178.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptide N protein.
Length = 240
Score = 37.5 bits (83), Expect = 0.062
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP R + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>BC024777-1|AAH24777.1| 240|Homo sapiens SNURF protein protein.
Length = 240
Score = 37.5 bits (83), Expect = 0.062
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP R + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>BC003180-1|AAH03180.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptide N protein.
Length = 240
Score = 37.5 bits (83), Expect = 0.062
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP R + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>BC000611-1|AAH00611.1| 240|Homo sapiens SNRPN protein protein.
Length = 240
Score = 37.5 bits (83), Expect = 0.062
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP R + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>AK222633-1|BAD96353.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptide N variant protein.
Length = 240
Score = 37.5 bits (83), Expect = 0.062
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP R + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>AF400432-1|AAK92481.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptide N protein.
Length = 240
Score = 37.5 bits (83), Expect = 0.062
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPX 694
P PP R + PP G PP G PP PPPG PPP P
Sbjct: 175 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPP 231
Query: 693 PPXXGGGRP 667
PP RP
Sbjct: 232 PPGMRPPRP 240
>BC141917-1|AAI41918.1| 198|Homo sapiens PRB1 protein protein.
Length = 198
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNP--PPGXX--PPPXXYF 703
P PPP + P G PP G PP ++P PPG PPP
Sbjct: 50 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQ---GPPPQGDKSRSPRSPPGKPQGPPPQGGK 106
Query: 702 SPXPPXXGGGRPR 664
PP GG +P+
Sbjct: 107 PQGPPPQGGNKPQ 119
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 33.9 bits (74), Expect = 0.77
Identities = 25/72 (34%), Positives = 27/72 (37%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P P RG L PP G+ P G PP + PPP PPP P P
Sbjct: 445 PGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPP-GPPPRGPPP-RLPPPAPPGIP-P 501
Query: 690 PXXGGGRPRXFP 655
P G RP P
Sbjct: 502 PRPGMMRPPLVP 513
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 33.9 bits (74), Expect = 0.77
Identities = 25/72 (34%), Positives = 27/72 (37%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P P RG L PP G+ P G PP + PPP PPP P P
Sbjct: 204 PGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPP-GPPPRGPPP-RLPPPAPPGIP-P 260
Query: 690 PXXGGGRPRXFP 655
P G RP P
Sbjct: 261 PRPGMMRPPLVP 272
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 33.9 bits (74), Expect = 0.77
Identities = 25/72 (34%), Positives = 27/72 (37%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P P RG L PP G+ P G PP + PPP PPP P P
Sbjct: 445 PGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPP-GPPPRGPPP-RLPPPAPPGIP-P 501
Query: 690 PXXGGGRPRXFP 655
P G RP P
Sbjct: 502 PRPGMMRPPLVP 513
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 33.9 bits (74), Expect = 0.77
Identities = 25/72 (34%), Positives = 27/72 (37%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P P RG L PP G+ P G PP + PPP PPP P P
Sbjct: 445 PGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPP-GPPPRGPPP-RLPPPAPPGIP-P 501
Query: 690 PXXGGGRPRXFP 655
P G RP P
Sbjct: 502 PRPGMMRPPLVP 513
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 33.9 bits (74), Expect = 0.77
Identities = 25/72 (34%), Positives = 27/72 (37%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P P RG L PP G+ P G PP + PPP PPP P P
Sbjct: 445 PGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPP-GPPPRGPPP-RLPPPAPPGIP-P 501
Query: 690 PXXGGGRPRXFP 655
P G RP P
Sbjct: 502 PRPGMMRPPLVP 513
>X17567-1|CAB57867.1| 231|Homo sapiens snRNP B protein protein.
Length = 231
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPP 715
P PP RG + PP G PP G PP PPPG PPP
Sbjct: 175 PPPPMGRGAPPPGMMGPPP-GMRPPMGPPM--GIPPGRGTPMGMPPPGMRPPP 224
>X15893-1|CAA33902.1| 231|Homo sapiens protein ( Human B cod gene
for B/B' snRNP associated protein. ).
Length = 231
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPP 715
P PP RG + PP G PP G PP PPPG PPP
Sbjct: 175 PPPPMGRGAPPPGMMGPPP-GMRPPMGPPM--GIPPGRGTPMGMPPPGMRPPP 224
>M34081-1|AAA36578.1| 224|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB mRNA, 3' end. ).
Length = 224
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPP 715
P PP RG + PP G PP G PP PPPG PPP
Sbjct: 168 PPPPMGRGAPPPGMMGPPP-GMRPPMGPPM--GIPPGRGTPMGMPPPGMRPPP 217
>BC080516-1|AAH80516.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 231
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPP 715
P PP RG + PP G PP G PP PPPG PPP
Sbjct: 175 PPPPMGRGAPPPGMMGPPP-GMRPPMGPPM--GIPPGRGTPMGMPPPGMRPPP 224
>BC003530-1|AAH03530.1| 234|Homo sapiens SNRPB protein protein.
Length = 234
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPP 715
P PP RG + PP G PP G PP PPPG PPP
Sbjct: 175 PPPPMGRGAPPPGMMGPPP-GMRPPMGPPM--GIPPGRGTPMGMPPPGMRPPP 224
>AY742712-1|AAU89981.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptide B protein.
Length = 231
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPP 715
P PP RG + PP G PP G PP PPPG PPP
Sbjct: 175 PPPPMGRGAPPPGMMGPPP-GMRPPMGPPM--GIPPGRGTPMGMPPPGMRPPP 224
>AL049650-7|CAB46714.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 231
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPP 715
P PP RG + PP G PP G PP PPPG PPP
Sbjct: 175 PPPPMGRGAPPPGMMGPPP-GMRPPMGPPM--GIPPGRGTPMGMPPPGMRPPP 224
>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
Length = 1709
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 819 PPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPP 688
PP PP G PP PP PPP Y P PP
Sbjct: 611 PPPPPPPPYLASLPLGYPPHQPAYLLPPRPDGPPPPEYPPPPPP 654
>J04564-1|AAA60151.1| 285|Homo sapiens SNRPB protein.
Length = 285
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPP---XXYFS 700
P PP RG + PP G PP G PP P G PPP +F
Sbjct: 174 PPPPMGRGAPPPGMMGPPP-GMRPPMGPM---GIPPGRGTPMGMPSGMRPPPPGCEAFFD 229
Query: 699 PXP 691
P P
Sbjct: 230 PWP 232
>AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant
protein.
Length = 410
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 742 PPPGXXXPPXFXFFPPPPXXXGGKTPXFPP 653
PPPG PP +PPP GG+ P PP
Sbjct: 364 PPPGLGLPPAS--YPPPAVPPGGQPPVPPP 391
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/75 (29%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXK-------NPPPGXXPPPX 712
P PPP + PP PP + PP +PPPG PP
Sbjct: 316 PVPPPPASFPPPAI--PPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPPA 373
Query: 711 XYFSPXPPXXGGGRP 667
Y P P GG+P
Sbjct: 374 SY--PPPAVPPGGQP 386
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/72 (30%), Positives = 23/72 (31%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP F PP PP PP PPP PP P P
Sbjct: 312 PPPPPVPPPPASF----PPPAIPPPTPGY---PPPPPTYNPNFPPPPPRLPPTHAVPPHP 364
Query: 690 PXXGGGRPRXFP 655
P G P +P
Sbjct: 365 PPGLGLPPASYP 376
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 819 PPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPPXXGGGRPRXFP 655
PP PP P PPP PPP SP PP GG P P
Sbjct: 320 PPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPN-SPAPPNPGGPPPAPPP 373
>U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein.
Length = 367
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PP F PP G PP PP PPPG P P P
Sbjct: 283 PPPPAAEEEASANYFNLPPSG--PPAVVNI--ALPPPPGIAPPPPPGFGPHMFHPMGPPP 338
Query: 690 PXXGGGRPRXFP 655
P P +P
Sbjct: 339 PFMRAPGPIHYP 350
>BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif protein
22 protein.
Length = 420
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PP F PP G PP PP PPPG P P P
Sbjct: 336 PPPPAAEEEASANYFNLPPSG--PPAVVNI--ALPPPPGIAPPPPPGFGPHMFHPMGPPP 391
Query: 690 PXXGGGRPRXFP 655
P P +P
Sbjct: 392 PFMRAPGPIHYP 403
>AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ10290 fis, clone MAMMA1002385, weakly similar to
RIBONUCLEOPROTEIN RB97D. ).
Length = 420
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PP F PP G PP PP PPPG P P P
Sbjct: 336 PPPPAAEEEASANYFNLPPSG--PPAVVNI--ALPPPPGIAPPPPPGFGPHMFHPMGPPP 391
Query: 690 PXXGGGRPRXFP 655
P P +P
Sbjct: 392 PFMRAPGPIHYP 403
>AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrome
protein family member 4 protein.
Length = 625
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PP F PP PP PP + PP PPP P P
Sbjct: 475 PPPPSSPSFPPHPDFAAPPPLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPPPG--PPPP 532
Query: 690 PXXGG-GRPRXFP 655
P G G+P P
Sbjct: 533 PFTGADGQPAVPP 545
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -1
Query: 774 GXPPXXXXXKNPPPGXXPPPXXYFS--PXPPXXGGGRP 667
G PP PPP PPP P PP G G P
Sbjct: 435 GSPPSSKPGFAPPPAPPPPPPPMIGIPPPPPPIGFGSP 472
>AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein.
Length = 496
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PP F PP PP PP + PP PPP P P
Sbjct: 346 PPPPSSPSFPPHPDFAAPPPLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPPPG--PPPP 403
Query: 690 PXXGG-GRPRXFP 655
P G G+P P
Sbjct: 404 PFTGADGQPAVPP 416
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -1
Query: 774 GXPPXXXXXKNPPPGXXPPPXXYFS--PXPPXXGGGRP 667
G PP PPP PPP P PP G G P
Sbjct: 306 GSPPSSKPGFAPPPAPPPPPPPMIGIPPPPPPIGFGSP 343
>X85133-1|CAA59445.1| 948|Homo sapiens RB protein binding protein
protein.
Length = 948
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSP 697
P PPP PP P F G PP PPPG P P +P
Sbjct: 382 PVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSV-PPPGFPPAPANLSTP 438
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 828 FXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPP 688
F PP G PP G P PP PPP F P PP
Sbjct: 284 FGQPPLGPLPPGPPPPVPGYGPPPGPP--PPQQGPPPPPGPFPPRPP 328
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 828 FXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPP 688
F PP G PP G P PP PPP F P PP
Sbjct: 284 FGQPPLGPLPPGPPPPVPGYGPPPGPP--PPQQGPPPPPGPFPPRPP 328
>K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary
proline-rich protein 1 gene, segment 1. ).
Length = 173
Score = 31.1 bits (67), Expect = 5.4
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Frame = -1
Query: 849 GXXXXFLFXXPPXGKX---PPXXXXFYXGXPPXXXXXKNPPP--GXXP--PPXXYFSPXP 691
G FLF P G PP G PP + PPP G P PP P
Sbjct: 4 GFYSVFLFSLCPLGNPQGPPPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP 63
Query: 690 PXXGGGRPR 664
P GG R R
Sbjct: 64 PPQGGKRSR 72
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -1
Query: 768 PPXXXXXKNPPPGXXPPPXXYFSPXPPXXGGGRPRXFPRXXXKKTP 631
PP + PP PPP P PP G G P P P
Sbjct: 277 PPPPPPSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPPSRAPTAAP 322
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 31.1 bits (67), Expect = 5.4
Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 3/75 (4%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPP--GXXPPPXXYFSP 697
P PP R + PP G PP + PP PPP PPP F P
Sbjct: 63 PRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFM-----PPPMSSMPPPPGMMFPP 117
Query: 696 -XPPXXGGGRPRXFP 655
PP G P P
Sbjct: 118 GMPPVTAPGTPALPP 132
>BC064553-1|AAH64553.1| 187|Homo sapiens PRH1 protein protein.
Length = 187
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Frame = -1
Query: 819 PPXGKX---PPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPPXXGGGRPRXFPRX 649
PP GK P G PP + PP PP P P GG PR PR
Sbjct: 86 PPQGKPQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP-PRG 144
Query: 648 XXKKTP 631
+ P
Sbjct: 145 RPQGPP 150
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -1
Query: 768 PPXXXXXKNPPPGXXPPPXXYFSPXPPXXGGGRPRXFPRXXXKKTP 631
PP + PP PPP P PP G G P P P
Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAP 322
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 775 GXAPXFXXX*KPPPGXXXPPXFXFFPPPPXXXGGKTPXFPP 653
G P F PPP PP PPPP G +P PP
Sbjct: 311 GPKPGFAPPPAPPP---PPPPMIGIPPPPPPVGFGSPGTPP 348
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -1
Query: 774 GXPPXXXXXKNPPPGXXPPPXXYFS--PXPPXXGGGRP 667
G PP PPP PPP P PP G G P
Sbjct: 307 GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSP 344
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PP F PP PP PP PP PPP P P
Sbjct: 347 PPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPP 406
Query: 690 PXXGGGRPRXFP 655
G+P P
Sbjct: 407 FTGADGQPAIPP 418
>BC033715-1|AAH33715.1| 816|Homo sapiens Similar to collagen, type
XVIII, alpha 1 protein.
Length = 816
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 745 KPPPGXXXPPXFXFFPPPPXXXGGKTP 665
+PPPG PP F P PP G + P
Sbjct: 2 RPPPGREGPPGFPGLPGPPGPPGREGP 28
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 828 FXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPP 688
F PP G PP G P PP PPP F P PP
Sbjct: 211 FGQPPLGPLPPGPPPPVPGYGPPPGPP--PPQQGPPPPPGPFPPRPP 255
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 828 FXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPP 688
F PP G PP G P PP PPP F P PP
Sbjct: 321 FGQPPLGPLPPGPPPPVPGYGPPPGPP--PPQQGPPPPPGPFPPRPP 365
>AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular
protein PACT protein.
Length = 1625
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSP 697
P PPP PP P F G PP PPPG P P +P
Sbjct: 425 PVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSV-PPPGFPPAPANLSTP 481
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -1
Query: 768 PPXXXXXKNPPPGXXPPPXXYFSPXPPXXGGGRPRXFPRXXXKKTP 631
PP + PP PPP P PP G G P P P
Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAP 322
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = -1
Query: 870 PXPPPXR--GXXXXFLFXXPPXGKXPPXXXXFYXGX-PPXXXXXKNPPPGXXPPP 715
P PPP R L P G PP G P PPPG PPP
Sbjct: 335 PPPPPNRMYPPPPPALLSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPP 389
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G P G PP PP PP P P P P
Sbjct: 1097 PPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP-PPPLPGAGIPPPP 1155
Query: 690 PXXGGGRP 667
P G G P
Sbjct: 1156 PLPGAGIP 1163
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G P G PP PP PP P P P P
Sbjct: 1097 PPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP-PPPLPGAGIPPPP 1155
Query: 690 PXXGGGRP 667
P G G P
Sbjct: 1156 PLPGAGIP 1163
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G P G PP PP PP P P P P
Sbjct: 1097 PPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP-PPPLPGAGIPPPP 1155
Query: 690 PXXGGGRP 667
P G G P
Sbjct: 1156 PLPGAGIP 1163
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G P G PP PP PP P P P P
Sbjct: 1097 PPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP-PPPLPGAGIPPPP 1155
Query: 690 PXXGGGRP 667
P G G P
Sbjct: 1156 PLPGAGIP 1163
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 775 GXAPXFXXX*KPPPGXXXPPXFXFFPPPPXXXGGKTPXFPP 653
G P F PPP PP PPPP G +P PP
Sbjct: 311 GPKPGFAPPPAPPP---PPPPMIGIPPPPPPVGFGSPGTPP 348
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -1
Query: 774 GXPPXXXXXKNPPPGXXPPPXXYFS--PXPPXXGGGRP 667
G PP PPP PPP P PP G G P
Sbjct: 307 GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSP 344
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PP F PP PP PP PP PPP P P
Sbjct: 347 PPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPP 406
Query: 690 PXXGGGRPRXFP 655
G+P P
Sbjct: 407 FTGADGQPAIPP 418
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 828 FXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPP 688
F PP G PP G P PP PPP F P PP
Sbjct: 284 FGQPPLGPLPPGPPPPVPGYGPPPGPP--PPQQGPPPPPGPFPPRPP 328
>AF352051-1|AAL05625.1| 1616|Homo sapiens proliferation
potential-related protein protein.
Length = 1616
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSP 697
P PPP PP P F G PP PPPG P P +P
Sbjct: 382 PVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSV-PPPGFPPAPANLSTP 438
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 31.1 bits (67), Expect = 5.4
Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 3/75 (4%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPP--GXXPPPXXYFSP 697
P PP R + PP G PP + PP PPP PPP F P
Sbjct: 63 PRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFM-----PPPMSSMPPPPGMMFPP 117
Query: 696 -XPPXXGGGRPRXFP 655
PP G P P
Sbjct: 118 GMPPVTAPGTPALPP 132
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -1
Query: 768 PPXXXXXKNPPPGXXPPPXXYFSPXPPXXGGGRPRXFPRXXXKKTP 631
PP + PP PPP P PP G G P P P
Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAP 322
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 31.1 bits (67), Expect = 5.4
Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 3/75 (4%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPP--GXXPPPXXYFSP 697
P PP R + PP G PP + PP PPP PPP F P
Sbjct: 67 PRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFM-----PPPMSSMPPPPGMMFPP 121
Query: 696 -XPPXXGGGRPRXFP 655
PP G P P
Sbjct: 122 GMPPVTAPGTPALPP 136
>AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.
Length = 1332
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PPP G P G PP PP PP P P P P
Sbjct: 564 PPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP-PPPLPGAGIPPPP 622
Query: 690 PXXGGGRP 667
P G G P
Sbjct: 623 PLPGAGIP 630
>AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding
protein 6 isoform 2 protein.
Length = 1758
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSP 697
P PPP PP P F G PP PPPG P P +P
Sbjct: 558 PVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSV-PPPGFPPAPANLSTP 614
>AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding
protein 6 isoform 1 protein.
Length = 1792
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSP 697
P PPP PP P F G PP PPPG P P +P
Sbjct: 558 PVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSV-PPPGFPPAPANLSTP 614
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 775 GXAPXFXXX*KPPPGXXXPPXFXFFPPPPXXXGGKTPXFPP 653
G P F PPP PP PPPP G +P PP
Sbjct: 311 GPKPGFAPPPAPPP---PPPPMIGIPPPPPPVGFGSPGTPP 348
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -1
Query: 774 GXPPXXXXXKNPPPGXXPPPXXYFS--PXPPXXGGGRP 667
G PP PPP PPP P PP G G P
Sbjct: 307 GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSP 344
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PP F PP PP PP PP PPP P P
Sbjct: 347 PPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPP 406
Query: 690 PXXGGGRPRXFP 655
G+P P
Sbjct: 407 FTGADGQPAIPP 418
>X07882-1|CAA30729.1| 226|Homo sapiens Po protein protein.
Length = 226
Score = 30.7 bits (66), Expect = 7.2
Identities = 21/74 (28%), Positives = 23/74 (31%), Gaps = 7/74 (9%)
Frame = -1
Query: 864 PPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXX-------PPPXXY 706
PPP G P + PP PP + PPP PP
Sbjct: 144 PPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGKP 203
Query: 705 FSPXPPXXGGGRPR 664
P PP GG PR
Sbjct: 204 QGPPPPPQGGRPPR 217
>X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein.
Length = 234
Score = 30.7 bits (66), Expect = 7.2
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Frame = -1
Query: 864 PPPXRGXXXXFLFXXPPXGKXPPXXXXFYX-GXPPXXXXXKNPPPGXXP------PPXXY 706
PPP G P + PP G PP PPPG P P
Sbjct: 152 PPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPPGGNPQQPQAPPAGKP 211
Query: 705 FSPXPPXXGGGRPR 664
P PP GG PR
Sbjct: 212 QGPPPPPQGGRPPR 225
>S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein.
Length = 238
Score = 30.7 bits (66), Expect = 7.2
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Frame = -1
Query: 864 PPPXRGXXXXFLFXXPPXGKXPPXXXXFYX-GXPPXXXXXKNPPPGXXP------PPXXY 706
PPP G P + PP G PP PPPG P P
Sbjct: 156 PPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPPGGNPQQPQAPPAGKP 215
Query: 705 FSPXPPXXGGGRPR 664
P PP GG PR
Sbjct: 216 QGPPPPPQGGRPPR 229
>K03207-1|AAA60188.1| 247|Homo sapiens salivary proline-rich
protein precursor protein.
Length = 247
Score = 30.7 bits (66), Expect = 7.2
Identities = 21/74 (28%), Positives = 23/74 (31%), Gaps = 7/74 (9%)
Frame = -1
Query: 864 PPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXX-------PPPXXY 706
PPP G P + PP PP + PPP PP
Sbjct: 165 PPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQDPPAGKP 224
Query: 705 FSPXPPXXGGGRPR 664
P PP GG PR
Sbjct: 225 QGPPPPPQGGRPPR 238
>BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein.
Length = 268
Score = 30.7 bits (66), Expect = 7.2
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Frame = -1
Query: 864 PPPXRGXXXXFLFXXPPXGKXPPXXXXFYX-GXPPXXXXXKNPPPGXXP------PPXXY 706
PPP G P + PP G PP PPPG P P
Sbjct: 186 PPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPPGGNPQQPQAPPAGKP 245
Query: 705 FSPXPPXXGGGRPR 664
P PP GG PR
Sbjct: 246 QGPPPPPQGGRPPR 259
>BC051816-1|AAH51816.1| 454|Homo sapiens family with sequence
similarity 113, member A protein.
Length = 454
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -1
Query: 741 PPPGXXPPPXXYFSPXPPXXGGGRPRXFPRXXXKKTPFWCXXXKXPXFFFFXXPXKFFKX 562
PPP PPP + P P P FP + TPF+ P FF P + F
Sbjct: 313 PPPSSLPPPMPFPYPLPQP---SPPPLFP-PLPQDTPFFPGQPFPPHEFFNYNPVEDFSM 368
Query: 561 XP 556
P
Sbjct: 369 PP 370
>BC037240-1|AAH37240.2| 454|Homo sapiens family with sequence
similarity 113, member A protein.
Length = 454
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -1
Query: 741 PPPGXXPPPXXYFSPXPPXXGGGRPRXFPRXXXKKTPFWCXXXKXPXFFFFXXPXKFFKX 562
PPP PPP + P P P FP + TPF+ P FF P + F
Sbjct: 313 PPPSSLPPPMPFPYPLPQP---SPPPLFP-PLPQDTPFFPGQPFPPHEFFNYNPVEDFSM 368
Query: 561 XP 556
P
Sbjct: 369 PP 370
>AL161656-2|CAC21464.1| 403|Homo sapiens family with sequence
similarity 113, member A protein.
Length = 403
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -1
Query: 741 PPPGXXPPPXXYFSPXPPXXGGGRPRXFPRXXXKKTPFWCXXXKXPXFFFFXXPXKFFKX 562
PPP PPP + P P P FP + TPF+ P FF P + F
Sbjct: 262 PPPSSLPPPMPFPYPLPQP---SPPPLFP-PLPQDTPFFPGQPFPPHEFFNYNPVEDFSM 317
Query: 561 XP 556
P
Sbjct: 318 PP 319
>AL161656-1|CAC21463.1| 454|Homo sapiens family with sequence
similarity 113, member A protein.
Length = 454
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -1
Query: 741 PPPGXXPPPXXYFSPXPPXXGGGRPRXFPRXXXKKTPFWCXXXKXPXFFFFXXPXKFFKX 562
PPP PPP + P P P FP + TPF+ P FF P + F
Sbjct: 313 PPPSSLPPPMPFPYPLPQP---SPPPLFP-PLPQDTPFFPGQPFPPHEFFNYNPVEDFSM 368
Query: 561 XP 556
P
Sbjct: 369 PP 370
>AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens
cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
Length = 169
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXP 691
P PP F PP PP PP PP PPP P P
Sbjct: 19 PPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPG--PPPP 76
Query: 690 PXXGG-GRPRXFP 655
P G G+P P
Sbjct: 77 PFTGADGQPAIPP 89
>AK056353-1|BAB71160.1| 454|Homo sapiens protein ( Homo sapiens
cDNA FLJ31791 fis, clone NT2RI2008749, weakly similar to
SPLICEOSOME ASSOCIATED PROTEIN 49. ).
Length = 454
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -1
Query: 741 PPPGXXPPPXXYFSPXPPXXGGGRPRXFPRXXXKKTPFWCXXXKXPXFFFFXXPXKFFKX 562
PPP PPP + P P P FP + TPF+ P FF P + F
Sbjct: 313 PPPSSLPPPMPFPYPLPQP---SPPPLFP-PLPQDTPFFPGQPFPPHEFFNYNPVEDFSM 368
Query: 561 XP 556
P
Sbjct: 369 PP 370
>AK026029-1|BAB15328.1| 403|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22376 fis, clone HRC07327. ).
Length = 403
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -1
Query: 741 PPPGXXPPPXXYFSPXPPXXGGGRPRXFPRXXXKKTPFWCXXXKXPXFFFFXXPXKFFKX 562
PPP PPP + P P P FP + TPF+ P FF P + F
Sbjct: 262 PPPSSLPPPMPFPYPLPQP---SPPPLFP-PLPQDTPFFPGQPFPPHEFFNYNPVEDFSM 317
Query: 561 XP 556
P
Sbjct: 318 PP 319
>AF134825-1|AAD54489.1| 243|Homo sapiens small nuclear
ribonucleoprotein B' protein.
Length = 243
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = -1
Query: 774 GXPPXXXXXKN-PPPGXXPPPXXYFSPXPPXXGGGRP 667
G PP PPPG PPP P PP RP
Sbjct: 207 GIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPRP 243
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 819 PPXGKXPPXXXXFYXGXPPXXXXXKNPPPGXXPPPXXYFSPXPP 688
PP PP PP PPP PPP Y PP
Sbjct: 71 PPPPPPPPPPQQPPPPPPPPSPGASYPPPQPPPPPPLYQRVSPP 114
>AF319523-1|AAK18178.1| 123|Homo sapiens RT-LI protein.
Length = 123
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = -1
Query: 870 PXPPPXRGXXXXFLFXXPPXGKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPP 715
P PP R + PP G PP G PP PPPG PPP
Sbjct: 34 PPPPVGRATPPPGIMAPPP-GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPP 83
>AF134832-1|AAD54487.1| 47|Homo sapiens small nuclear
ribonucleoprotein N protein.
Length = 47
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -1
Query: 810 GKXPPXXXXFYXGXPPXXXXXKN-PPPGXXPPPXXYFSPXPPXXGGGRP 667
G PP G PP PPPG PPP P PP RP
Sbjct: 1 GMRPPMGPPI--GLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPRP 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,509,054
Number of Sequences: 237096
Number of extensions: 2147318
Number of successful extensions: 9065
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 3307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6639
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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